| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0658 |
|---|
| Symbol | |
|---|
| ID | 5108988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 733845 |
|---|
| End bp | 734294 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640501871 |
|---|
| Product | azurin |
|---|
| Protein accession | YP_001186158 |
|---|
| Protein GI | 146305693 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3241] Azurin |
|---|
| TIGRFAM ID | [TIGR02695] azurin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.000453216 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGTA ACGCTGCTCT AATCGCTCTG CTCGGCCTGG CCAGCACCCC GCTCCTGGCT
GCCGAATGCG CAGTGGATGT CGAGTCGACC GACCAGATGA CCTTCAACAC CCAGGCCATC
TCCGTCAGCA AGAGCTGCAA GACCTTCACC GTCAACCTCA AGCACACAGG CAGTCTGCCC
AAGACCGCCA TGGGCCACAA CTGGGTGCTG AGCAAGACTG CCGACATGCC CGGCATCGCC
ACCGACGGCA TCCCCGCCGG CCCCGACGCC AGCTACCTCA AGGCCGGTGA CGAGCGCGTC
ATCGCTCATA CCGATCTGAT CGGCGGTGGC GAGAGCACCT CGGTGACCTT CGATGTCAGC
AAGCTGGCGG CAGGCGAAGA CTACAGCTTC TTCTGCTCCT TCCCCGGCCA CTACTCGCTG
ATGAAAGGCA GCCTGACCCT GGCCGACTGA
|
|---|
| Protein sequence | MLRNAALIAL LGLASTPLLA AECAVDVEST DQMTFNTQAI SVSKSCKTFT VNLKHTGSLP
KTAMGHNWVL SKTADMPGIA TDGIPAGPDA SYLKAGDERV IAHTDLIGGG ESTSVTFDVS
KLAAGEDYSF FCSFPGHYSL MKGSLTLAD
|
|---|
| |