Gene Pmen_0584 details

Gene Information

• Locus tag: Pmen_0584
• ID: 5109547
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: +
• Start bp: 641910
• End bp: 642653
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640501797
• Product: lipopolysaccharide kinase
• Protein accession: YP_001186086
• Protein GI: 146305621

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 0.12664
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTGATT TCATCGCCGC GCAGGATCGC GCGCTGCTCG AGCGTCACGG CCTGACCAGT 
TTCGAGGCGT TGTGGGCGCT GCAACTGGCG GCCGTGGACG AGCCCAACAC CGAGCGCGGT 
GGCTGGAGCA CTGTGTATCG CCTTGAGCTG GACGACCGCG CCTTCTACCT CAAGCGGCAG 
AGCAATCACC TGACTTACAG CCTGCTGCGC CCGTTCGGCG AGCCAACCTT CGCTCGCGAG 
TTTCGCAACA TTCGCCGTTA TGCCGAATTG GACATTCCGG CCTTGCAGGC TGCCTTCTTT 
GCCGAGCGCA AAGTACCCGG CGAGCGCCGC GCTATCCTGC TGACCCGTGC GCTGGATGGC 
TGGCAGGATC TGGACAGCTG GTTGGCGCGC TGGCAGACAG TCGACGCCGC GCGGCGTACA 
GCTGTCCTGC GTGCCTGTGG CGAGCTGGCG CGATGCCTGC ACCAGGCTGG GCAGGTGCAT 
GGCTGCTTCT ATCCCAAGCA CATCTTCCTG CGCGAGCAGG GCGATAATGT CGAGGCGCAA 
CTGATCGACC TGGAGAAGAC CCGGCCATTG TTGCTGGGGC GACGTGATCG AATCAGGGAT 
CTGGAACCCC TGTTGCGCCG CGTCAGGGTC TGGAGCGAGG CCGAGGTGCG CGAGCTGCTG 
GCGGCCTATC TGGGCAGCCC TGCGCAGGTC GATATCTGGT GGCGGCTGCT CGAGGCGCGC 
CAGCGCCACA AGGAGGCGCG TTGA 

 

Protein sequence

MSDFIAAQDR ALLERHGLTS FEALWALQLA AVDEPNTERG GWSTVYRLEL DDRAFYLKRQ 
SNHLTYSLLR PFGEPTFARE FRNIRRYAEL DIPALQAAFF AERKVPGERR AILLTRALDG 
WQDLDSWLAR WQTVDAARRT AVLRACGELA RCLHQAGQVH GCFYPKHIFL REQGDNVEAQ 
LIDLEKTRPL LLGRRDRIRD LEPLLRRVRV WSEAEVRELL AAYLGSPAQV DIWWRLLEAR 
QRHKEAR