| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0549 |
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| Symbol | |
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| ID | 5108173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 587708 |
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| End bp | 589309 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640501762 |
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| Product | sporulation domain-containing protein |
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| Protein accession | YP_001186051 |
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| Protein GI | 146305586 |
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| COG category | [S] Function unknown
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase)
[COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.528502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.783944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTT TGCATGCTGA TGAAGCTTTC CTGGCGCATT ACCAGTTCAG TCACGACCCG
TTCGCGCCGC GTGTTCCCGG TTTCAAGTTC TTCCCCGCCC AGCGCAAGCC GGTTCTGGGG
CAGTTGCATC ATCTGGCGCG CTACAGCCAG TTGTTGTTGG CGGTAGTCGG TCCGCAGGGT
AGCGGCAAGA CCCTGCTGCG CCAGGCGTTG GTCGCCAGCA CCAACAAGCA GGCGGTGCAA
AGTGTGGTGA TCGCCCAGGG TGTGGCGGGT AGCGATGCGT TGCTGCGTCA GGTAGCCCAG
GGGCTTTCGG TCGCTCAGGC GGATGTGCGC TCGATTCTGA CGCAGGTGGG GCAATTAGCC
CTGACCGGTC AGGAGGTCTA CCTGCTCATC GATGATGCCG ACCAGCTGGA CGATGCCGCG
TTGAAAAGCG TGCTGGCATT GGCCGAGGGC GATAGTGAGG GGCGGCCGCA TGTGTTTCTC
TTCGCCGAGC AGGACCTGCT GAGCCGGCTG GAGGCGCTGG CCGGTGGTGA GGAGTGCTAT
CACGCCATCG AGCTGCAGCC CTACAGCGAG GAGGAAACGC GCGATTACCT GGCGCAGCGC
CTGGAGGGCG CCGGACAGGG AATTGACGTG CTGAGCGAGG AGCAGATCGA GGAGATTCAT
CTGCGCTCTC AGGGGTGGCC GGGGGGCATC AACCAGGAGG CGCGAGAGCT TTTGGTCGAG
CAGATGCTGG CCCAGCGTTC GGCTGGGCGC GGTGCAGGTG GTGGATTCTC CTTGCCGAAG
AAGCATCTGC TGGCATTGGC TGTGGTGCTG GTCGGCGTTG CCGCTGCCTG GTTCATGCAG
GGACGTGAGT CGTCCCCTGC GCCGGTGGCC ACGAATACCA CGCTGCCTTT GCAGTCTTCG
GCACCGGCGG TGGAGGCCGG TGAGCCGGCT CAGGCGCCTG CGACTGAAAG TCGCACGCCG
GCCATCGAGT TTGCCGGTGC CAGCCAACCG CTGCCATTGC CGCTGGTGGG CGAGGCGCAG
ACGGTCATTC GCCAGCCTCT GGCCGAGGCC GCGGGTGAAG AGCTGGACAA TTTCGAGCCG
CCAGCTTCTC CTGAACCCTC GACGGTAACC CTGCCGCCTG ATCCAATCCC TGCTGCACCT
GCACCTGCAC CTGCACCTGC ACCTGCACCT GCACCTGCAC CTGCACCTGC ACCTGCACCT
GCCAAGCAGC CCGAACCCGC TGCTCCCAAG CCGGTCGTTG CTCCAGCTCC AGCGCCGGCT
CCAGCGCCGG CTCCCGAGCC CAAGCCGGCG CCGGCTCAGC CAGCGGCACC GAGCAGCGCT
GCCAGCAACT GGTACGCGCA GCAGCCCGGC TCTCGTTATG CGCTGCAGGT CGTGGGTTCG
CGGTCGGAGT CCAATATCCA GGCGTTGGTG CGCGAAGGGG GTAGCGAGTA CCGTTACTTC
AAGAAGATGC ACCAGGGCCA GCCGCTGTAC GTCCTGACCT ACGGTAGCTT CGCCACACGC
GATGCTGCTC AGGCGGCGGT GAAGACGCTT CCGGCCAAGT TGCAGGCCAA CAAGCCCTGG
CCGCGTACGC TGGCGAGCAT CCAGCAGGAG ATGAGCCGCT AA
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| Protein sequence | MTSLHADEAF LAHYQFSHDP FAPRVPGFKF FPAQRKPVLG QLHHLARYSQ LLLAVVGPQG
SGKTLLRQAL VASTNKQAVQ SVVIAQGVAG SDALLRQVAQ GLSVAQADVR SILTQVGQLA
LTGQEVYLLI DDADQLDDAA LKSVLALAEG DSEGRPHVFL FAEQDLLSRL EALAGGEECY
HAIELQPYSE EETRDYLAQR LEGAGQGIDV LSEEQIEEIH LRSQGWPGGI NQEARELLVE
QMLAQRSAGR GAGGGFSLPK KHLLALAVVL VGVAAAWFMQ GRESSPAPVA TNTTLPLQSS
APAVEAGEPA QAPATESRTP AIEFAGASQP LPLPLVGEAQ TVIRQPLAEA AGEELDNFEP
PASPEPSTVT LPPDPIPAAP APAPAPAPAP APAPAPAPAP AKQPEPAAPK PVVAPAPAPA
PAPAPEPKPA PAQPAAPSSA ASNWYAQQPG SRYALQVVGS RSESNIQALV REGGSEYRYF
KKMHQGQPLY VLTYGSFATR DAAQAAVKTL PAKLQANKPW PRTLASIQQE MSR
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