| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0505 |
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| Symbol | |
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| ID | 5108424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 541984 |
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| End bp | 545607 |
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| Gene Length | 3624 bp |
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| Protein Length | 1207 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640501718 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001186007 |
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| Protein GI | 146305542 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATGGA TCTTCATGCT GGTCGGACTG GTGCTCGGCG CGGGCGTCAG CGAATCCGTC
ACGGGCGCCA TTCTTGGCGG CCTGCTCGGC CTCAGTCTGG GGCAGGCGCT GCGTCTGCAA
GGGCTGGAGA CGCGCAACGC GCAACTGACC GCACAGCTCA AGGAATTCGC CGAGCGCTTC
GAGCGCGGCA CGCGCGCCAT GCACGAGCGC CTGGTCAAGG TGGAGCAGGG CCAGCGCGAT
GAATCCGCGC CCGAGCCGAC TCCAGTCCAG GCCAGCGTCA ATAGCGAGCC GCAAGCCGAA
CCAGCGCTGG AACCGGTGGT GGCGCAGGCC GCCGAGCCGA CGCCGGAACC GGAGCTGGAC
TGGACGCTGG CGCCGGAGAT CGAGGCGCCA GCCCCGCAGC CGGCCGCAGA ACCTGCACCC
GCCGCCGATC CAGCTGCTCA TCGACCGCCA CCCGCGCCGC AGCAAAGCCC CTGGCGCTCG
CAGACGCCGC GTGAACCGAA TCTGCTCGAA CGCGGTTTCG CCGCCGCCAA GGCCTGGCTG
CTGGGCGGCA ACACCGTATT GCGGGTCGGC GTGGTGCTGC TGTTCCTCGG CCTGGCCTTT
TTGCTGCGCT ACGCCACCGA AGGCGTCGAG GTGCCGATCG AGCTGCGCTA CATGGGCGTG
GCGGCCAGTG CCCTGGCCTT GCTCGGCCTG GGCTGGTGGC TACGCCGGCG CAATCCCGGT
TACGCCCTGG TGCTGCAGGG CACCGGTATC GCCGTGCTGT ATTTGACGGT GTTCGCCGCC
ATGCGCCTGC ATCCATTGCT CGACCCTGGC ATGGCGCTGG GGTTGCTGGT GGCGGTCACG
CTGTTCTCGG CGATTCTCGC CGTGCAGCAG AACGCCCTGG GTCTGGCCGC CGCGGCAGCG
CTTGGCGGTT TCGCCGCACC GATCCTGACT TCCACCGGCA GCGGCAACCA TGTCGCGCTG
TTCTCCTATT TCGCCCTGCT CAATGCCGGC ATCTTCGCCA TCGCCTGGTT CAAGGCCTGG
CGCCTGCTCA ACCTGATCGG CTTCGTCGGC ACCTTCGGCA TCGGCTTCGC CTGGGGCCTG
CGTTCCTACA CGCCGGAGCT GCTGGGCAGC ACCCAGCCGT TCCTGATCCT GTTCTTTTTG
ATGTACGTGG CCATCGGCCT GTTGTTCGCC CGCCGCACCC TGCGTGACGC GGCGGATGCG
CCCGAGACGC GTGACGAGTT GCTGCGCTGG TCGGCGCGGC GTGGCGACTA TGTCGATGCC
ACCACCCTGT TCGGCCCGCC GCTGATCGGC TTCGGCCTGC AGGTGGCGCT GGTGCGCCAT
ATCGAGTTCG CCGCGGCGTT CAGCGCCCTC GGCCTCGGTC TGTTCTATCT GCTGCTGGCG
CGCGTACTCA AGGCGCGCGC CGGCGAGCGC GCCTTGCTGC TGGTGGAAAC CTGCCTGGCG
CTTGGTGTGG TATTCGCCAG TCTGGCCATT CCGCTGGGGC TGGATGCGCG CTGGACGGCG
GCGGCCTGGG CGGTGGAAGG CGCCGGTATC TACTGGCTCG GCCTGCGCCA GGGCCGACCG
CTGGCGCGCG CCTTCGCCCT GTTGCTGCAG CTCGGCGCAG CGCTGGCCTT CCTCAGTGGC
CTGGATCTTG GTTACGCCAG CCTGCTGGAC GGTTCGCCGC TGGGCGCGCT GATGCTCGGC
GTGGCGCTGC TGTTCAGCTA CTGGCAACTG CGCCGCGAAC CTGAGGCGGG CAGCGTTTGG
GAGAGGCGGC TGCTGCCCTG GCTCGGCATC GCCGGCCTGG CGTTTCTCTA TCTGATCGCA
CCGCTGCTGT TCGAGGCCCC CGGCACGGCC ATCGCCTGGG CGCTGGCGGG GCTGGCGACG
CTGTTGGTCG GGCTGCGCAT CGCGGCGCCG AGCTTCGTCT ACAGCGCCTT TGCCGTGCAG
TTGCTCGGCG GGCTGCTGTT CCTCGGGCAG ATGGCACTGG ATTCGCTGTT CGGCGGTAAC
AGCTTCAAGG CGGGCTGGTT CGGCCTGCTG GCCGCGTCGA TGGTCGGTTT CGGCCTGATT
GCCGGCATGC TGCTGGCGGC GCGCGACCCG CAAATTCGCG AGAACCGCCG GCTGCTCGGC
GCATTGTCGA TGGTCATGCT GGTGGGCCTG GTGTTCATCA ATCTGGCCGT GCTCTTCGTT
CTGCCCTGGG TGGCGGCTGC GGCGGTATGG GGCGGCACGG GGCTGCTGAT TCTCTGGCTG
GCGCTGTATC TGCAGCAACG CGCCGCTTTC CTGTTCAGCC TGGCGCTGCA GCTGTTCGCC
GGCCTGGCCT TCCTCGCCGC CGGACCGTTG CTGCTGGCAG GAATCAGCGG CGAGGGCCTG
TCGCCGCTGG CGCATACCGG CTTCTGGACG CCCGCTGTGC TGGGCCTGGC CGCGCAGATC
GGCGCCTGGC GTCTACACAG CCTGGCGCAC GGCGGTCACG ACACGGGCAT CGACGGCGTC
AGCCTGCAGC GCCTGGGCCA GCTGTTACTG GCCTGGGGCG CGGCCTGGTG GGCACTGGCC
CTGGCCAGCG AGGTGCTGCG CTTCGTGGCG CCGCAGCTGC AGGTAGCTGT TCTGTTGCTG
GCGGCGGCGC TGACGACCCT GCTCTGGATG CTGCTGGTGC TGCGCACGCG CTGGCGCGAG
CTGGCGCTGC TGTGCAGCCT GCTGGCGCCG GTGGCCGGTC TGATCCTGGC CTATGCCTGG
CATCCCTTGC ATCACCCGGC GGCGAATTTC GGCTGGCTCG GCTGGGCTGC GGTGCTGGTG
GTGCATCTGC TCGCCCTGCG CCGTCTGGCT GACCTGCTGC CGAGCCGCGC GGCCAGCGTC
GCCCATGTGC TCGGCTGCTG GTTGCTGATC GGCGTGCTGG CGCTGGAACT GCGCTACCTG
CTGCTGAGCC TGGCCGATCA CTACAACGCC TGGCGCTGGC TGGGCTGGGC GTTGCTGCCG
ACGGCCTATC TCTGGCTTAT GGCGCAGGCG CGTCGCCTGC CCTGGCCGGT GGCCGGCTTC
GAGCGCGAAT ACCGCCTGTG GGCAGCGGCG CCGCTGGCCG CGCTGATGCT CGCCTGGTTC
TGGCTGGCCA ACGCCAACAG TGCCGGCGAC AGCGATCCGC TGCCTTACCT GCCGCTGTTC
AACCCGCTGG AGCTGGGGCT GCTGCTGTGC CTGGGTGCGC TGCTGGCCTG GGGCCGCTTC
GCCCTGCCGC GTTTCGGCCT GGAACCTACG CGGGCGCTGC AGGTGGTGCA GGGCGTGGCG
GGGCTGTCGC TGTTCGCCCT GCTGACGCTG ATGGTGATGC GTACCGCCCA CCACTGGGGC
GGCGTGCCCT GGCAGAGCGC TGCGCTGTTC GACTCGATGC TGGTGCAGGC CGGCCTGTCC
ATCGTCTGGA CCCTGATTGC CCTGGCGCTG ATGCTCTTCG GCCACCTGCG CGTACGCCGC
GAGCTGTGGC TGGTGGGAGC GGCGCTGATC GCCCTGGTGG TGGCCAAGCT GTTCTTCGTC
GAACTGGGCA ACCGCGGCGG CCTGGAGCGC ATCGTGTCGT TCATCGGGGT CGGCGTGCTG
CTGCTGGTGG TGGGTTACTT CGCCCCCTTG CCGCCACGCA AGTCCGAACC TTCAACCAGC
AACGAGCAGG AGCCTGCCGC GTGA
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| Protein sequence | MQWIFMLVGL VLGAGVSESV TGAILGGLLG LSLGQALRLQ GLETRNAQLT AQLKEFAERF
ERGTRAMHER LVKVEQGQRD ESAPEPTPVQ ASVNSEPQAE PALEPVVAQA AEPTPEPELD
WTLAPEIEAP APQPAAEPAP AADPAAHRPP PAPQQSPWRS QTPREPNLLE RGFAAAKAWL
LGGNTVLRVG VVLLFLGLAF LLRYATEGVE VPIELRYMGV AASALALLGL GWWLRRRNPG
YALVLQGTGI AVLYLTVFAA MRLHPLLDPG MALGLLVAVT LFSAILAVQQ NALGLAAAAA
LGGFAAPILT STGSGNHVAL FSYFALLNAG IFAIAWFKAW RLLNLIGFVG TFGIGFAWGL
RSYTPELLGS TQPFLILFFL MYVAIGLLFA RRTLRDAADA PETRDELLRW SARRGDYVDA
TTLFGPPLIG FGLQVALVRH IEFAAAFSAL GLGLFYLLLA RVLKARAGER ALLLVETCLA
LGVVFASLAI PLGLDARWTA AAWAVEGAGI YWLGLRQGRP LARAFALLLQ LGAALAFLSG
LDLGYASLLD GSPLGALMLG VALLFSYWQL RREPEAGSVW ERRLLPWLGI AGLAFLYLIA
PLLFEAPGTA IAWALAGLAT LLVGLRIAAP SFVYSAFAVQ LLGGLLFLGQ MALDSLFGGN
SFKAGWFGLL AASMVGFGLI AGMLLAARDP QIRENRRLLG ALSMVMLVGL VFINLAVLFV
LPWVAAAAVW GGTGLLILWL ALYLQQRAAF LFSLALQLFA GLAFLAAGPL LLAGISGEGL
SPLAHTGFWT PAVLGLAAQI GAWRLHSLAH GGHDTGIDGV SLQRLGQLLL AWGAAWWALA
LASEVLRFVA PQLQVAVLLL AAALTTLLWM LLVLRTRWRE LALLCSLLAP VAGLILAYAW
HPLHHPAANF GWLGWAAVLV VHLLALRRLA DLLPSRAASV AHVLGCWLLI GVLALELRYL
LLSLADHYNA WRWLGWALLP TAYLWLMAQA RRLPWPVAGF EREYRLWAAA PLAALMLAWF
WLANANSAGD SDPLPYLPLF NPLELGLLLC LGALLAWGRF ALPRFGLEPT RALQVVQGVA
GLSLFALLTL MVMRTAHHWG GVPWQSAALF DSMLVQAGLS IVWTLIALAL MLFGHLRVRR
ELWLVGAALI ALVVAKLFFV ELGNRGGLER IVSFIGVGVL LLVVGYFAPL PPRKSEPSTS
NEQEPAA
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