Gene Pmen_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0504 
Symbol 
ID5108423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp541364 
End bp541759 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content62% 
IMG OID640501717 
Producthypothetical protein 
Protein accessionYP_001186006 
Protein GI146305541 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGC CCCGCCTGAT AGCCGCCGCC GAGATCGACC GCCTGGAAAC CTGGGCCAAA 
TACACGGCCG ACATGTGCCA CAGCTGCATC TCCAGCTGCT GCACCCTGCC CGTGGAAGTA
CGCCTGAACG ATCTGATCCG CCTGGAACTG GTGGACGAGT TCGAGCGCAG CGAGCCACCG
AAGAACATCG CCAAGCGCCT GCAGAAGGAT GGCGTGGTCG AGCGCTTCAA CCAGAAGTCG
GGCATCTTCA CCCTGACCCG CATGTCCAAC AACGACTGCC TGTTCCTCGA TCGCAAGACG
CGCCTGTGCA CCGTCTACGA CAAGCGCCCG GATACCTGCC GCCATCATCC CAAGGTCGGC
CCGCGGCCGG GGTATTGCGC TTACAAACCG AAGTAG
 
Protein sequence
MMKPRLIAAA EIDRLETWAK YTADMCHSCI SSCCTLPVEV RLNDLIRLEL VDEFERSEPP 
KNIAKRLQKD GVVERFNQKS GIFTLTRMSN NDCLFLDRKT RLCTVYDKRP DTCRHHPKVG
PRPGYCAYKP K