Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0425 |
Symbol | |
ID | 5108347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 449065 |
End bp | 450111 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640501641 |
Product | recA protein |
Protein accession | YP_001185930 |
Protein GI | 146305465 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGG CAAAAAGCAA AGCGTTAGAA GCGGCTCTTT CTCAAATTGA GAAGCAGTTT GGTAAGGGTT CCATCATGCG GCTGGGCTCC GACCGCACTA TGGATATAGA TGTTATATCG ACTGGCTCAC TCGGCTTGGA CATCGCCTTG GGGGTGGGTG GGTTGCCGCG CGGCCGTATC GTTGAAATCT ATGGGCCGGA GTCTTCTGGT AAAACCACGC TTACGCTGTC GGTGATTGCT GAAGCGCAGC GTCAAGGTTT GACTTGTGCA TTTGTCGATG CTGAGCACGC GCTTGATCCG ATCTACGCAG CCAAGCTCGG CGTTAATATT GACGAACTCC TGTGCTCACA GCCTGACACT GGTGAGCAGG CACTTGAAAT CGTAGACATC TTGACGCGTT CTGGGGCAGT CAATCTTATT GTCGTTGACT CTGTTGCTGC TCTTGTTCCG AAGGCTGAGA TTGAAGGCGA AATCGGGGAT TCCCATGTAG GTCTTGCCGC CCGAATGATG TCGCAGGCGA TGAGGAAGAT CACTGGTAAC CTGAAGAACT CCAATACTAT GTGTATCTTC ATTAACCAGA TTCGTATGAA GATTGGCGTG ATGTTCGGTA GCCCGGAAAC CACCACCGGC GGTAACGCCC TGAAGTTCTA CGCCTCGGTG CGCCTCGACA TCCGTCGTAC CGGCGCGGTC AAGGAAGGCG AGGAAGTGGT GGGCAGCGAA ACCCGTGTGA AAGTGGTCAA GAACAAAGTT GCTGCTCCAT TCAGGCAAGC AGAGTTCCAG ATCGTTTACG GTCAGGGTAT TAGCAAGGCG GGTGAGATCG TTGACCTCGC TGTTGCTAAC AACTTTGTTG AAAAGTCAGG CGCTTGGTAC TCCTTCGAAG GTAACAAGAT CGGCCAAGGT AAGGCCAATA CCATGAAATG GCTGTTGGAA AACAAACCTA CTATGGACAA GCTGGAAGGT ATGATTCGCG AAAAGTTGAT GTCTAAGCCT CAGGCTGAAA CCTCTGCACG TCTCGCAACC CAAGAAGAAC TGGCTGACGA CTATTGA
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Protein sequence | MDQAKSKALE AALSQIEKQF GKGSIMRLGS DRTMDIDVIS TGSLGLDIAL GVGGLPRGRI VEIYGPESSG KTTLTLSVIA EAQRQGLTCA FVDAEHALDP IYAAKLGVNI DELLCSQPDT GEQALEIVDI LTRSGAVNLI VVDSVAALVP KAEIEGEIGD SHVGLAARMM SQAMRKITGN LKNSNTMCIF INQIRMKIGV MFGSPETTTG GNALKFYASV RLDIRRTGAV KEGEEVVGSE TRVKVVKNKV AAPFRQAEFQ IVYGQGISKA GEIVDLAVAN NFVEKSGAWY SFEGNKIGQG KANTMKWLLE NKPTMDKLEG MIREKLMSKP QAETSARLAT QEELADDY
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