Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0405 |
Symbol | |
ID | 5108327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 419826 |
End bp | 420359 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640501621 |
Product | putative CheW protein |
Protein accession | YP_001185910 |
Protein GI | 146305445 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCGC AGACTCCTTT CCAGATTCTC CTTGAGATTG ACCAGCGTTG CCGTGCCCTG GCGGCTGGCC TGCCGTCGCA GCAGGCGGCG GTGCAGACCT GGAGCGGCAT CGGCTTTCGT ATGGGGGAGC GCCTGTTCGT TGCACCCATG GGGGAGGTGG GTGAAGTTTT GCACGAGCCG CGCTATACCT TGTTGCCAGG CGTGAAGAGT TGGGTCAAAG GGGTGGCCAA CGTGCGTGGC CGCCTGTTGC CGATCATGGA TCTGTGCGGC TTCTTCGGTA ATGAACTGTC GCCGCTGCGC AAGCTGCGGC GGGTGCTGGT GGTCGACCAC CAGGAAATCT TCGCCGGCCT GACGGTCGAC GAAGTCTTCG GTATGCAGCA TTTCCCCGTG GATGCCTACT CAGAACAACT GCCGCCTCTC GAGGCGAGCA TTGCGCCGTT CATCCACGGT GTCTTCCAGC GAGAACAGCC CTGGTTGGTA TTCAGCCCCT ACGCGCTGGC TGCCGATCCG GGTTTTCTCG ATGTGGCTTA TTAA
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Protein sequence | MSAQTPFQIL LEIDQRCRAL AAGLPSQQAA VQTWSGIGFR MGERLFVAPM GEVGEVLHEP RYTLLPGVKS WVKGVANVRG RLLPIMDLCG FFGNELSPLR KLRRVLVVDH QEIFAGLTVD EVFGMQHFPV DAYSEQLPPL EASIAPFIHG VFQREQPWLV FSPYALAADP GFLDVAY
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