Gene Pmen_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0405 
Symbol 
ID5108327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp419826 
End bp420359 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content61% 
IMG OID640501621 
Productputative CheW protein 
Protein accessionYP_001185910 
Protein GI146305445 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGC AGACTCCTTT CCAGATTCTC CTTGAGATTG ACCAGCGTTG CCGTGCCCTG 
GCGGCTGGCC TGCCGTCGCA GCAGGCGGCG GTGCAGACCT GGAGCGGCAT CGGCTTTCGT
ATGGGGGAGC GCCTGTTCGT TGCACCCATG GGGGAGGTGG GTGAAGTTTT GCACGAGCCG
CGCTATACCT TGTTGCCAGG CGTGAAGAGT TGGGTCAAAG GGGTGGCCAA CGTGCGTGGC
CGCCTGTTGC CGATCATGGA TCTGTGCGGC TTCTTCGGTA ATGAACTGTC GCCGCTGCGC
AAGCTGCGGC GGGTGCTGGT GGTCGACCAC CAGGAAATCT TCGCCGGCCT GACGGTCGAC
GAAGTCTTCG GTATGCAGCA TTTCCCCGTG GATGCCTACT CAGAACAACT GCCGCCTCTC
GAGGCGAGCA TTGCGCCGTT CATCCACGGT GTCTTCCAGC GAGAACAGCC CTGGTTGGTA
TTCAGCCCCT ACGCGCTGGC TGCCGATCCG GGTTTTCTCG ATGTGGCTTA TTAA
 
Protein sequence
MSAQTPFQIL LEIDQRCRAL AAGLPSQQAA VQTWSGIGFR MGERLFVAPM GEVGEVLHEP 
RYTLLPGVKS WVKGVANVRG RLLPIMDLCG FFGNELSPLR KLRRVLVVDH QEIFAGLTVD
EVFGMQHFPV DAYSEQLPPL EASIAPFIHG VFQREQPWLV FSPYALAADP GFLDVAY