Gene Pmen_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0404 
Symbol 
ID5108326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp419415 
End bp419780 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content59% 
IMG OID640501620 
Productresponse regulator receiver protein 
Protein accessionYP_001185909 
Protein GI146305444 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGAA TTCTGATTGT TGATGACTCC CCGACCGAGA TGTACAAGCT GACCGCCATG 
CTGGAAAAAC ATGGGCATCA GGTACTCAAG GCGGAAAACG GCGCTGACGG CGTGGCTCTG
GCCCGCCAGG AAAAGCCCGA CGCGGTGCTG ATGGACATCG TCATGCCCGG CCTCAACGGC
TTTCAGGCGA CGCGTCAGCT GACCAAGGAC GCCGAGACCA GCCACATTCC GGTGATCATC
GTCACCACCA AGGATCAGGA AACCGACAAG GTCTGGGGTA AGCGCCAAGG CGCCAAGGAC
TACCTGACCA AGCCGATCGA CGAAGATACC TTGCTGAAGA CCCTCAATGC GGTACTGGCC
GGCTGA
 
Protein sequence
MARILIVDDS PTEMYKLTAM LEKHGHQVLK AENGADGVAL ARQEKPDAVL MDIVMPGLNG 
FQATRQLTKD AETSHIPVII VTTKDQETDK VWGKRQGAKD YLTKPIDEDT LLKTLNAVLA
G