| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0221 |
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| Symbol | |
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| ID | 5106188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 224384 |
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| End bp | 225679 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640501437 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001185727 |
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| Protein GI | 146305262 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGC CCAACCCCTC GCGCCGGATT CTGGTGGTCG CCCTGCTGAT GGCGGTGATG
ATCATCAGCG TGCTGGACAA GACCATCTTC GCCTTCGCCG GCCCGCAGAT CATCGACGAG
CTGCAGCTGT CGCCGGAGCA GTTCGGCTTC ATCGGCAGCG CGTTCTTCTT CCTCTATTCG
ATTTCCGGGG TGCTGGTGGG GTTTCTCGCC AACCGCCTGC CGAGCCGCTG GATTCTCTCC
GGCATGTCGC TGGTGTGGAT GGCCGCGCAG CTGCTCACCG CGCTGGCGAC CAGCTTCTAC
ACCCTGGTCG CCAGCCGCCT GCTGCTCGGC GCCGGCTGCG GCCCGGGCAC CGCGGTGACC
CAGCACGCCT GCTTCAAGTG GTACGCGCCG CGCGAGCGGG TGCTGCCGGC AGCACTGATT
CAGGTGGCGA TCATGCTCGG CGCCATCGCC GGTGCCCTGG CCCTGCCGCT GCTGATCGAG
CGCCTGGGCT GGCGCGCCGG CTACCTGCTG CTGGCCGGCG TCGGCCTGCT CTGGCTGCTG
CTGTGGCAGC TGTGCGGCCG CGAGGGCCAG TACGACGACG CCAATGACGA CAGCGGCGGC
GCCGCTCTGC CGTACCGCCA CCTGCTGCTC AACCGCACCT TCGTCGGCAT CACCCTGATC
GCCTTCTGCA GCTACCTGCC CAACGCCCTG CTCTACAGCT GGCTGCCCAC CTACCTGCAG
AAGGGCCTGG GGCTGACGCC GATGCAGTCC GGCTACCTGG TGCTGTCCAC CACCCTCGGC
GTGATCGTCC TCAACCTGCT GGTTTCCAGC CTGTCGCAAC GGGCCCTGCA ACGCGGCGCC
AGCGTGCGCG CGGCGATGGT CATGCCGCCG CTGCTGGCCT GCCTGGTCGC CGCCCTGGCC
TTCGCCCTGA TGGGCCTGAG CGCCACCGGC CTGGCCGCCA CCCTGGGGCT GTTCCTCGTC
GGCGGCATCC TGGTCAACCT GCTCTCGGCC TTCGGCTACA GCATCGTCGC CTACATAGTC
CCGGCACGGC AGCGCGGCAG CATGCTGGCC ATCCATATCG GTCTGCTGAC CAGCGCCGGC
ATGCTCGCCC CGCATCTGGT CGGCCAGGCC ATCGGCTGGC AGGGCGGCGA CCTGGCCGCC
GGCTTCGAGC TGGCCATCGG CCTGTTCGGC CTCGCCCTGC TGGCCAGCAC CCTGCTCGGC
CTGCTGCTGA TCGACCCGGA GCGCAGCCGC CGCGACCTGG CCGCCCACGC CGACACCCCC
GAAACCATCC CCGCGCCGGC CCCGAGCCAG GCCTGA
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| Protein sequence | MTQPNPSRRI LVVALLMAVM IISVLDKTIF AFAGPQIIDE LQLSPEQFGF IGSAFFFLYS
ISGVLVGFLA NRLPSRWILS GMSLVWMAAQ LLTALATSFY TLVASRLLLG AGCGPGTAVT
QHACFKWYAP RERVLPAALI QVAIMLGAIA GALALPLLIE RLGWRAGYLL LAGVGLLWLL
LWQLCGREGQ YDDANDDSGG AALPYRHLLL NRTFVGITLI AFCSYLPNAL LYSWLPTYLQ
KGLGLTPMQS GYLVLSTTLG VIVLNLLVSS LSQRALQRGA SVRAAMVMPP LLACLVAALA
FALMGLSATG LAATLGLFLV GGILVNLLSA FGYSIVAYIV PARQRGSMLA IHIGLLTSAG
MLAPHLVGQA IGWQGGDLAA GFELAIGLFG LALLASTLLG LLLIDPERSR RDLAAHADTP
ETIPAPAPSQ A
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