Gene Pmen_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0219 
Symbol 
ID5106186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp221603 
End bp222754 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content71% 
IMG OID640501435 
Producthypothetical protein 
Protein accessionYP_001185725 
Protein GI146305260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT CCTGTTTCGC CCAGAGCTAC GCCGAAGCCC GGCAGAAATT TCTCGCCAGC 
TGCGCCCGCC GCGGCCTCGC CGTGGAGAGC CACGTCCACC CGCTGCCCGG CCGCGACGGC
GAACAACTGG CCATCGACGT GGCCCGCCTC GGTGCCGCCG ACGCCGCCAA CCTGCTGGTG
CTGAGCAGCG GCTGCCACGG CATCGAGGGT TTCTGCGGCT CGGCCATCCA GATCGACCGG
CTCGACGACG ACGCCTGGTT CGCCGCCTGC CAGCGCGGCG ACCTGGCGCT GCTGTACATC
CATGCGCTGA ATCCCTACGG CTTTTCCTGG GAGCGCCGGG TGACCCAGGA AAACGTCGAC
CTCAACCGCA ACTTCCAGGA CTTCGCCGCG CCGCTGGCGG ACAACCCCGA CTACCGCGCG
GTGGCCAAAC TGCTGCTGCC CGAGCGCTGC CCGCCGACCC TGGCGAGCAC CCTGGGGCTG
TACGGCTACG CCCTGCGTCA TGGGCGCAAG GCGCTGCAGG CGGCGATCTC GCGCGGCCAG
CACGGCGACC CGCGCGGCCT GTTCTTCGCC GGCACCGAGC CGACCTGGAG CAACCGCCAG
CTGCGCCAGA TTCTTCGTCA GCACGGCCGC CAGTGCCGGC GCATCGGCTG GATCGACGTG
CACACCGGGC TCGGCCCCAG CGGCTACGGC GAGCGCATCT ACAAGGGCCG CCAGGAGCCC
GCGGACATCG CCCGCGCCCG TCAGTGGTGG GGGCCGCAGG TGACCAACAG CGCCGAGGGC
AACTCCGCCT CCAGCGAGCT CAACGGCACC CTCGACCTGG CGGTGCTGGA TGAATGCGCC
CAGGCCCAGT ACAACGGCCT GACCCTGGAG TACGGCACCC AGCCGGGACT CAAGGTGCTC
ACCGCGCTGC GCGCCGAGCA GTGGCTGGAG AACCGCCCGG ACACCGACGC CGCCACCCGC
GCACGGATCA AGGCGCAGCT GCGCGCCGCC TTCTACGTCG AGACCGACGC CTGGAAACGC
CAGGTGCTGG AACAGGCCCG CGAGGTGCTG GAGCTGACCC GCCAGGGCCT GGCCACGCCG
TTGCGAGCCC TGCACCAGAG CGAGAGCCAG GCAATTGCCG AGCAATACTC GGGAATGCGC
GCCCGTTCAT AA
 
Protein sequence
MNLSCFAQSY AEARQKFLAS CARRGLAVES HVHPLPGRDG EQLAIDVARL GAADAANLLV 
LSSGCHGIEG FCGSAIQIDR LDDDAWFAAC QRGDLALLYI HALNPYGFSW ERRVTQENVD
LNRNFQDFAA PLADNPDYRA VAKLLLPERC PPTLASTLGL YGYALRHGRK ALQAAISRGQ
HGDPRGLFFA GTEPTWSNRQ LRQILRQHGR QCRRIGWIDV HTGLGPSGYG ERIYKGRQEP
ADIARARQWW GPQVTNSAEG NSASSELNGT LDLAVLDECA QAQYNGLTLE YGTQPGLKVL
TALRAEQWLE NRPDTDAATR ARIKAQLRAA FYVETDAWKR QVLEQAREVL ELTRQGLATP
LRALHQSESQ AIAEQYSGMR ARS