| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0202 |
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| Symbol | glcE |
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| ID | 5106169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 205097 |
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| End bp | 206152 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640501418 |
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| Product | glycolate oxidase FAD binding subunit |
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| Protein accession | YP_001185708 |
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| Protein GI | 146305243 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.435093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGG ATTTCGACGC CAGCGCCGCG CTGCTGGAAC AGGTCAACCA CGCGCTGAAC
AGCGCCACGC CGCTGCGCAT CCAGGGCAGC GGCAGCAAGG CCCATCTGGG TCGCGCCACC
CCGGGCGAAG TGCTGGACAC CCGTCAGCAT CGCGGCATCG TCAGCTATGA CCCCACCGAG
CTGGTGCTCA CCGCCCGTGC CGGGACGCCG CTGGCCGAGA TCGAGTCGGC GCTGGAGGCG
AACAACCAGA TGCTGCCGTG CGAGCCGCCG CACCTGGGCG ATGGCGCCAC CCTGGGTGGC
ATGGTCGCCG CCGGGCTGTC CGGCCCGCGC AGGCCCTGGG CCGGTTCGGT GCGCGACCAG
GTGCTCGGCA CCCGCGTGAT CACCGGCCAG GGCAAGCTGC TGCGCTTCGG CGGCGAGGTG
ATGAAGAACG TCGCCGGTTA CGACCTGTCG CGCCTGATGG CCGGCAGCTT CGGCTGCCTC
GGCCTGCTCG CCGAGGTGTC GCTCAAAGTG CTGCCCAAAC CGCGTCAGGT GCTCAGCCTG
CGCCTGGTAA TGGACGCTCA GCAGGCGCTG AACAAGCTCG CCGAATGGGG GCAGCAGCCG
CTGCCGATCA GCGCGGCCAG CCATGACGGT GCGGCGCTGC ATCTGCGCCT GGAAGGCGGC
GAAGGCTCGG TTCTGGCCGC GCGCCAACGC CTGGGCGGCG AGGAGATCGA CAACGCTTAC
TGGTATGAGC TGCGCGAGCA GCGCCTGCCG TTCTTCGCCG GCGAAGGCAC GCTGTGGCGG
CTGTCATTGC CGCTGAACAG CGCTCTGCTC GTCCTGCCCG GCCGCCAGCT GATCGACTGG
GGCGGCGCGC AGCGCTGGCT GAAGTCCGAT GCCGACGGCG AACTGATCCA GCGCGTGGCC
GCCAAGCTCG GCGGCCACGC CACCTGCTTC GCCGCCGGCC AGACGCAACC CTTCCAGCCG
CTGGCGGCGC CGCTACTGCG CTACCAGCGC CAGCTGAAGA ACCAGCTCGA CCCCCAGGGC
ATCTTCAACC CTGGCCGCCT ATACGCCGAG GTATAA
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| Protein sequence | MQQDFDASAA LLEQVNHALN SATPLRIQGS GSKAHLGRAT PGEVLDTRQH RGIVSYDPTE
LVLTARAGTP LAEIESALEA NNQMLPCEPP HLGDGATLGG MVAAGLSGPR RPWAGSVRDQ
VLGTRVITGQ GKLLRFGGEV MKNVAGYDLS RLMAGSFGCL GLLAEVSLKV LPKPRQVLSL
RLVMDAQQAL NKLAEWGQQP LPISAASHDG AALHLRLEGG EGSVLAARQR LGGEEIDNAY
WYELREQRLP FFAGEGTLWR LSLPLNSALL VLPGRQLIDW GGAQRWLKSD ADGELIQRVA
AKLGGHATCF AAGQTQPFQP LAAPLLRYQR QLKNQLDPQG IFNPGRLYAE V
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