| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0191 |
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| Symbol | |
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| ID | 5106871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 193427 |
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| End bp | 194161 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640501407 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_001185697 |
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| Protein GI | 146305232 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.915338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA CCTGCGCCAT CGACTACCGC TACGCCGCCG AACAGGGCGG AGCCGCGCTG
TTCGCCCCCG GGGCCGAGCA GAAGTGGCTG CTGCAGTACC TGCCGCTGGT CAAGCGCATC
GTCAGCCAGC TGGCGTTGCA GGCCAACCAG GTGCTCGATC GCGAGGACAT GGAGCAGATC
GGCCTGATGG GTCTGCTCGA ATGCCTGCGT CGCTACGGCA CGCCGGACGA ACAGTTCGGT
CGCTTCGCTG CGCTGCGCAT CCGTGGCGCG ATTCTCGACG AGTTGCGCCG CCAGGACTGG
CGACCGCGCC AGGTGCGTCA GCAGACCCAC AGGATTCGCG ACGCCATCCG CCAGCTGGCC
CGCCAGCTCG GTCGCGTGCC GCAGGAGGAG GAAATCCTCG CCGCCGCCGG CATCGACGCC
AAGACCTATC AGGAGTTTCT CCAGGCCGAC GCCTGCGAGG CCATCGAAAG CCTCGACGAG
CTGCTGCAGA GCGGCCATGA GGGCTTCGTC TGCGGTGCCA GCGCAGTGGA GGAGCGGGTG
CTCAAGGAGC GCCTGCTGAC CCAGGCGTTG AGCCAGCTCA GCGAGCGCGA ACGGCTGGTG
CTGACCCTTT ACTACCAACA CGAGCTGAGC CTCAAGGAAA TCGCCCTGGT GCTGGAGCTG
AGCGACGCGC GCGTCTGTCA GCTGAGCAAG CAGGCGATCG CCAAGGCCAG CCGCTACCTG
AACGAGAGAG GCTAG
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| Protein sequence | MNATCAIDYR YAAEQGGAAL FAPGAEQKWL LQYLPLVKRI VSQLALQANQ VLDREDMEQI
GLMGLLECLR RYGTPDEQFG RFAALRIRGA ILDELRRQDW RPRQVRQQTH RIRDAIRQLA
RQLGRVPQEE EILAAAGIDA KTYQEFLQAD ACEAIESLDE LLQSGHEGFV CGASAVEERV
LKERLLTQAL SQLSERERLV LTLYYQHELS LKEIALVLEL SDARVCQLSK QAIAKASRYL
NERG
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