| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0185 |
|---|
| Symbol | |
|---|
| ID | 5106865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 188598 |
|---|
| End bp | 189494 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640501401 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001185691 |
|---|
| Protein GI | 146305226 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGGGC GTCTGTTCTT TCTCTGCAGT CTGCTGGCCT TCAGCGGCCA GGCCGCTGCC
CTGACCATCT ACAAGTACGT CGACAAGAAC GGCGTGGTGA CCTATAGCGA CCAGGCCGCG
CCCGGCGCCC AGGTGTTCGT GTTCAACGAC CGCATGGTCG AGCGCCTGGA CAACCAGGTG
AAGCTGGAAA CCAAGAAGCA CGAGGCCGGC GAGACCCTGC TGATCCGCAA CGACCTGTAC
GCCCCGGTGG AAATCGAGCT GAAGCTGGAG CAGGTGGACA ACGCCATCGG TGCGCCGGAC
AAGCCGATTC GCTGGGTGCT GCCGCCGCGC AGCAATATCC GCCTGGCCAC CCTCGCCCCG
CAGGACGCCT CCAAGCCGCT GCGCTACAAG CCCAGGTTGC GCTATGCCCT CGGTGATCCG
CGCCTGCAGC CAAGCATCCA TCGTTACCCG CTGCCCTGGC GCGGGGGGCC GTTCCGCCAG
ACCCAGGGCG CCAACGGCAC CTACAGCCAC TTCACCCCCA AGGGCCGCTA CGCGGTGGAC
ATCGCCATGC CCGAGGGCAC GCCCATCGTC GCCGCGCGCG GCGGCGTGGT GATCAAGACC
GAGAACCAGC AGAGCGGGCG CGGCAACAAC CCGGCCGGCA ACTTCGTGCG CATCCTGCAC
GACGACGGCA CCATGGGCGT CTACCTGCAC CTGATGAAGG GCTCGGTAGC CGTGCGCGAG
GGCCAGCGCG TGGCGACCGG CCATCTGCTC GCCCGTTCCG GCAATACCGG CAACAGCACC
GGCCCGCACC TGCATTTCGT GGTGCAGCGC AATGTCGGCC TGGCGGTCGA ATCCATCCCC
TTCAACTTCG CCCAGCCGGT CAACAGCCTG CCCAACTTCG CCGTCGGCGG CGAATAG
|
|---|
| Protein sequence | MLGRLFFLCS LLAFSGQAAA LTIYKYVDKN GVVTYSDQAA PGAQVFVFND RMVERLDNQV
KLETKKHEAG ETLLIRNDLY APVEIELKLE QVDNAIGAPD KPIRWVLPPR SNIRLATLAP
QDASKPLRYK PRLRYALGDP RLQPSIHRYP LPWRGGPFRQ TQGANGTYSH FTPKGRYAVD
IAMPEGTPIV AARGGVVIKT ENQQSGRGNN PAGNFVRILH DDGTMGVYLH LMKGSVAVRE
GQRVATGHLL ARSGNTGNST GPHLHFVVQR NVGLAVESIP FNFAQPVNSL PNFAVGGE
|
|---|
| |