Gene Pmen_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0184 
Symbol 
ID5106864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp187542 
End bp188450 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID640501400 
Productresponse regulator receiver protein 
Protein accessionYP_001185690 
Protein GI146305225 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG TCAGTGTGCT GGTGGTGGAT GACGCGACCT TTATCCGTGA TCTGGTCAAG 
AAAGGGCTGC GCGATCACTT TCCCGGCGTA CAGATCGACG AGGCAGTCAA CGGGCGCAAG
GCCCAGCAAC TGCTGGGTCG GCAAGATGTC GACCTGATTC TCTGCGACTG GGAAATGCCG
GAGATGTCCG GCCTCGAGCT GCTGACCTGG TGTCGCGAGC AGGAGCGCCT GAAAACCACG
CCCTTCATCA TGGTCACCAG CCGTGGCGAC AAGGAAAACG TGGTGCAGGC GATCCAGGCC
GGCGTTTCCG ACTACATCGG CAAGCCGTTC TCCAACGAGC AGCTGGTGAC CAAGGTGAAG
AAGGCGCTGA GCCGCGCCGG CAAGCTGCAG GCGCTGGCTG CCAGTGCGCC GCCGAAGATG
CTCAGCAGCG GCGGTTTCGC CAACGACTCG CTGGCCGCGC TGACCGGCGG CAAGGCCGAG
GTGGTCAAGC CCAGTGCACC GACCCCGCCG CCTGCCACTG CCGCTGCGCC GAGCGCCGCG
CCTGCACCCG CCGCCGCCAG CAAGGCGCCG GCCGGTCGTG GCCAGGGCCA GCTGCGCCTG
CCGGGCGGCA GCATGGCCTG CGTGATCAAG GCGCTGAGCC TCAAGGAGGC CCTGCTGGTG
GTCAAGCGCG GCGAGCCATT GCCGCAGGTG CTGGAAAGCG CGGTGCTCGA TCTGGAACAG
GGCGAGGCGG CGGAAACCGC GCGACTCAAC GGCTATCTGC ATGCGGTGGC GGCCTTCGAG
CCCAAGCCCG ATAGCGAATG GCTGCAGCTG ACCTTCCGTT TCGTCGACCG CGACCCGCAG
AAGCTCGATT ACCTGTCCCG CCTGATCGCC CGCGGCACCG CGCAGAAGCA CTTCGTCCCC
GGCGCGTAG
 
Protein sequence
MSKVSVLVVD DATFIRDLVK KGLRDHFPGV QIDEAVNGRK AQQLLGRQDV DLILCDWEMP 
EMSGLELLTW CREQERLKTT PFIMVTSRGD KENVVQAIQA GVSDYIGKPF SNEQLVTKVK
KALSRAGKLQ ALAASAPPKM LSSGGFANDS LAALTGGKAE VVKPSAPTPP PATAAAPSAA
PAPAAASKAP AGRGQGQLRL PGGSMACVIK ALSLKEALLV VKRGEPLPQV LESAVLDLEQ
GEAAETARLN GYLHAVAAFE PKPDSEWLQL TFRFVDRDPQ KLDYLSRLIA RGTAQKHFVP
GA