Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0159 |
Symbol | |
ID | 5106839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 158425 |
End bp | 159297 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640501375 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_001185665 |
Protein GI | 146305200 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.171713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGCC GCTGGCGAAA GACCCGTGCG GTTGGCCTGT GCGACCCACG GGTCAACCCG CACTGCCAGC CAAACGCCGA ATGGCCCAGC GACGGCCTGT TGCGTCTGCT CAGTTTCAAC GTGCAGGTCG GCATCAACAC CCAGCGTTAC CATCACTACC TGACTCGCAG CTGGCAGCAT CTGCTGCCGC ATGCCGGACG TGCCGGCAAT CTGCAGCGCA TCGGCGACCT GCTCGCCGAC TTCGATCTGG TCGCCCTGCA GGAGGTCGAT GGCGGCAGCC TGCGTTCGGG CTACGTCAAT CAGGTGGAAT ATCTGGCCCA GCAGGGCGCC TTTCCCTACT GGTATCAGCA GCTCAATCGC AACCTCGGGC GCTTCGCCCA GCACAGCAAC GGCGTGCTCA GCCGTCTGCG TCCGACCCTG CTGGAGGATC ACCCGCTGCC GGGGCCGCCA GGGCGCGGGG CGATTTTCCT GCAGCTGGGC GAGGGCGAAC ACGCCCTGTG CGTGGTGATG ATGCACCTCG CCCTGGGCGC GCGTACCCGT ACCCGGCAGC TGGCCTACAT CCGCGAGCGG GTCGGCGAGT TCCGCCACCT GGTGTTGATG GGCGACATGA ACACCCATGC CGTCGACCTG CTGGAGAACT CGCCGCTGCG CGATCTCGGC CTGATCGCCC CGCAGGCCGA AGCGACCTTT CCCAGCTGGC GGCCACAGCG CTGCCTGGAC CATATCCTGC TCAGTTCCGA ACTCGAACTG GGGCGCGTCG ACGTACTCAG CCAGCCGATT TCCGACCACC TGCCGGTGGC CGTGGAAATC CGTCTGCCGG GCGCTCAGAA TGCTGCGCCA ATGCCTATGC TGAAGACGCC ATCCCCTGAG TAA
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Protein sequence | MLRRWRKTRA VGLCDPRVNP HCQPNAEWPS DGLLRLLSFN VQVGINTQRY HHYLTRSWQH LLPHAGRAGN LQRIGDLLAD FDLVALQEVD GGSLRSGYVN QVEYLAQQGA FPYWYQQLNR NLGRFAQHSN GVLSRLRPTL LEDHPLPGPP GRGAIFLQLG EGEHALCVVM MHLALGARTR TRQLAYIRER VGEFRHLVLM GDMNTHAVDL LENSPLRDLG LIAPQAEATF PSWRPQRCLD HILLSSELEL GRVDVLSQPI SDHLPVAVEI RLPGAQNAAP MPMLKTPSPE
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