Gene Pmen_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0147 
Symbol 
ID5106827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp146940 
End bp147671 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID640501363 
Producthypothetical protein 
Protein accessionYP_001185653 
Protein GI146305188 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT TCCGTCCCGG TTGGCTGCCC AGCCTGCTGG TTGCCCTGCT GCTGCCCGGC 
CTGCTGTGGC TGGGCGTCTG GCAGCTGCAG CGCGGTGAGG AGAAGCGCGC GTTGCTGGCC
AGCTTCGAGG CGCGGCGCCA CGCCGAGCCG ATCAGTCTCG AACAGCTCGA GCCCATGCCG
GACCCCGCCT ACCGCCGCGT TCAGCTGCGT GGACACTTCG ATGGCGAACA CAGCCTGCTG
CTGGACAGCC GCATCCGCGA CGGCCATGCC GGCGTCGAGG TGCTGCAACC CTTCTACGAC
CAGCCCAGCG GCCTCTGGGT ACTGCTCAAC CGCGGCTGGC TGCCCTGGCC CGACCGGCGC
ACCACGCCGC GCTTCGACAC TCCCGATGGC GTGCTGCAGC TCACGGCCTG GGTCTACGTG
GCGCCCTCCG GCGGTCTGAA CCTGCGTTCC GGTGCGGCGA CCGAAGGCTG GCCGCGGCTG
ATCACCCAGG TCGAGGCCGA AAATCTGTGG CGGCAACTGG GCCGCGGTGG CCTGCCGTTC
GAAGCGCGGC TGGAGGACGG TCCGGCCAGC TATCGGGTCG ACTGGCCGGT GGTGGCCATG
AGCCCGAGCA AACACCTGGG CTATGCGGTG CAGTGGTTCG CCCTGGCGGC CGCGCTGCTT
GGCCTGTTCA TCTATCTCGG AATCCACAAT GCACGGGAGA GTCGTCATGA ACCCAGCCAT
CGCCATGCCT GA
 
Protein sequence
MNAFRPGWLP SLLVALLLPG LLWLGVWQLQ RGEEKRALLA SFEARRHAEP ISLEQLEPMP 
DPAYRRVQLR GHFDGEHSLL LDSRIRDGHA GVEVLQPFYD QPSGLWVLLN RGWLPWPDRR
TTPRFDTPDG VLQLTAWVYV APSGGLNLRS GAATEGWPRL ITQVEAENLW RQLGRGGLPF
EARLEDGPAS YRVDWPVVAM SPSKHLGYAV QWFALAAALL GLFIYLGIHN ARESRHEPSH
RHA