| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0138 |
|---|
| Symbol | |
|---|
| ID | 5106818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 138990 |
|---|
| End bp | 139385 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640501354 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001185644 |
|---|
| Protein GI | 146305179 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGC CCGAATACCA TATGTTCGCC ACCGCGCCCG CACCGGTCGC ACCGTTTTCT
CACGCCTGCG AAGCCGATGG CTGGGTGTTC ATCACCGGCC AGCTGCCCAT CGATCCGGGC
AATGAAGCGG CGCCCCTGCC CGAGGGCATC GAGGCGCAGA CGCACAAGAC GTTCGACAAC
CTGCTGGTGG TGCTCGAGGG GCTCGGCCTG GGGCTGGAGA ACGTGGTCTC GGCGCGCGCC
TTCCTCACCG ATTTCTATGG CGACTACGCG CGCTTCAATG TGGTGTACGC CAGCTACTTC
CCCGAAGACA AACGCCCGGC GCGCACCTGC ATCGGCACCA CGGGCCTGGC GCGGCATGCG
CTGGTGGAGA TCGACTTCAT CGCCAGGCGG CCGTGA
|
|---|
| Protein sequence | MSMPEYHMFA TAPAPVAPFS HACEADGWVF ITGQLPIDPG NEAAPLPEGI EAQTHKTFDN
LLVVLEGLGL GLENVVSARA FLTDFYGDYA RFNVVYASYF PEDKRPARTC IGTTGLARHA
LVEIDFIARR P
|
|---|
| |