Gene Pmen_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0112 
Symbol 
ID5106297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp113794 
End bp114204 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content47% 
IMG OID640501328 
Producthypothetical protein 
Protein accessionYP_001185618 
Protein GI146305153 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCG TCAATAATAA ATATTCATTC TTCTTGCTCT TTTTTACATT CCCAGCTCTT 
AGCGATGCCA TTCAAAAGTC ATGTGAAGTG ATTGAGGACT CCCAACAAGT CGCCCAGTGC
GCGGAATATG CTAAAGGGCA GTCGGATAAG CTTCTGAATT CAGCCTACAG GGCAGCTCTT
GATCGCATCA GGCATCAGTA CAGGCAAGCG CCCCTGATGG CGGATCAGTA TATTTCTCTG
CTGCGTGGGG CACAGCGAGA ATGGATCAAG CTACGAGACG CCGATTGCAA ACTTGAGGCC
TTTGAAATAG AGGAAACTGC AGAAGCGTAT CAGGTAACTA TTAACAACTG CCTAGCAAGG
ATGAGTAACG ATAGGGCAGA TTATTTGAAG CACATCGCGC CTGACATATG A
 
Protein sequence
MFGVNNKYSF FLLFFTFPAL SDAIQKSCEV IEDSQQVAQC AEYAKGQSDK LLNSAYRAAL 
DRIRHQYRQA PLMADQYISL LRGAQREWIK LRDADCKLEA FEIEETAEAY QVTINNCLAR
MSNDRADYLK HIAPDI