Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0105 |
Symbol | |
ID | 5106290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 104713 |
End bp | 105441 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640501321 |
Product | protein phosphatase 2C domain-containing protein |
Protein accession | YP_001185611 |
Protein GI | 146305146 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.895672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCAG TCGTCAACGC CTGGCGCAGC GCCGCGCGCA CCGACACCGG CAAGGTGCGC GCGCGCAACG AGGATGCCTT CCTGGCCCTG CCCGAGCAGG GCCTGTGGGT GGTGGCCGAC GGCATGGGCG GGCACCAGAA CGGCGCCCTG GCCAGCCGCC TGATCGTCGA GCAGCTGGCC GAGCTGGCGC AGGGCAGCCT GGAGCAGCGT CTGGTGGAGC TGCGTCAGGC GCTGCACCGG CTCAATCATC GCCTCGGTCA GGAGCTGACG GTGACCGCCG ACCGCCCGGA CACGGTGATC GGCAGCACCG TGGTCGCCCT GCTGCTCGAC GGCGACCGCG CCGCCTGCGT CTGGGCCGGT GATAGCCGCT GCTACCTGTG GCGCGGTGCG CGTCTGTATC AGCTCAGCCG CGACCATTCA CTGGTGCAGC AACTGATCGA CGAACAGGGC CTGACGCCGC AGGAGGCCGC GCGCCACCCG GCGGCGCATG CCCTGACCCG CGCCATCGGC GCCAGCGAGA CCCTGCAGCT GGACATCCTC GAACTCGACG TGCTGCCCGG CGACGTCTTC CTGCTGTGCA GCGACGGCCT CTACCAGGGC GTTTCCGCCG ACGAGCTGGG CGCCTGCCTC AACCTGCCTT CGCCGCACCT GGCCGTGGAG CGCCTGTTCC AGCGCGTGCT CGACGGCCCG GCCCGTGACA ACCTCAGCGC CGTGGTGATC CGCCAATGA
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Protein sequence | MPAVVNAWRS AARTDTGKVR ARNEDAFLAL PEQGLWVVAD GMGGHQNGAL ASRLIVEQLA ELAQGSLEQR LVELRQALHR LNHRLGQELT VTADRPDTVI GSTVVALLLD GDRAACVWAG DSRCYLWRGA RLYQLSRDHS LVQQLIDEQG LTPQEAARHP AAHALTRAIG ASETLQLDIL ELDVLPGDVF LLCSDGLYQG VSADELGACL NLPSPHLAVE RLFQRVLDGP ARDNLSAVVI RQ
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