| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3997 |
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| Symbol | |
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| ID | 5081506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4650832 |
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| End bp | 4652115 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640501209 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001185499 |
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| Protein GI | 146295075 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTA TTCTTTGTAA ACGCACAGCC AAAAAACCGA TAGGCAATCG GTTTTCTGCT
GCATTGATAG GAATGAGTAT TATCCTATCG GCATCCGCAG CGACAGATGA AAGCCCGCAA
AAAATCAGTT TATCTGATGC GGTTACCATG ACTCTCACCC ATCATCCTGA TTTACAAGCT
TTTGTATCGC AGCAGCGAGT CTGGGAGGGG CGTATTCAGC AAGCGAGTGT CGGTGAACGC
CCAGAAATTG GGCTGATGAT TGAGGATGCG TTAGGCACAG GGGAACACAG TGCATTGAAA
AGTATGCAAT CTACGCTCAC CTTCTCATGG TTGCTGCAAC AGGATTTAAT TGATAGTCGT
GTTAACACGG CAAAAACAGA AGCCACTAAA CTGGCCATAG AGAAGCAAAT CAAGGCGCTC
GATTTGTCTT CACAGGTGGC TAAGCACTTT ATCGATATAC TGGTTAAACA GGAGCGCCTT
AAGCTCAATG TGATGGCAAA GGCTCAGGCT GAGAACGTTG TTGGTACGAT TGCCAAGCGG
GTGCAAGTAG GTAAAAGTTC GGCGGTTGAA ATGCAGTTGG CAAAGGCTGA ATTTATCCGC
CGAGGACTGG CGGTCGAAGA TATCGAACAC GAGCTGCAAG CGAGCCAGTA TCAACTAGCC
TCTTTTTGGG GAAAGCCTCA AGCATCATAT TATTTCAACG GTGATCTGCT GGACATGCCA
ACTGTGCCGT CGGTTGACAG TCAGCTTACC CTGCTAAAGC AGAATCCGCG TTTTCAACAG
TTTGCCAGTG CTCAGCGTAT TGCTCAGTCA CAAATGGAAC TGGCACGAAT TGAAGCCAAA
CCCCAGTGGC AATTTACCGC TGGGGTCCGT CGTTATGAGG CAAGCGATGA CTTTGGTTTA
GTGGCAGGCG TCTCTATCCC TTGGGGCACA AGTGACCGTA ATGCAGGGAC AATCGCAGCC
CTCCACGCTC AGCAGGATGT GTTGGCCAAC GAACAAAGCG CATTAATGCA AGCTCAAGAT
GCTCAACTCT ATGTACTGCT ACAGGAAATG GCACACTCTG CGCATGTGAT AGATACAGTG
CGCAACAGCA TAGTGCCCAC CCTCGAAAAA GCCCTGTCAG AGGCAAGTAA TGCTTTTGAT
AAAGGTCAAC TCAGTTATAA CCAATTTAAT GATGTGTATC GGGAATTACT CAGTGCTCAA
TATCAGTTGC TGGATGCCTT TGAAAGCTTG CATTTACAAC ACATCGAAAT TCAACGCCTG
ACGGGTACGT CCATTTCTCA GTGA
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| Protein sequence | MKAILCKRTA KKPIGNRFSA ALIGMSIILS ASAATDESPQ KISLSDAVTM TLTHHPDLQA
FVSQQRVWEG RIQQASVGER PEIGLMIEDA LGTGEHSALK SMQSTLTFSW LLQQDLIDSR
VNTAKTEATK LAIEKQIKAL DLSSQVAKHF IDILVKQERL KLNVMAKAQA ENVVGTIAKR
VQVGKSSAVE MQLAKAEFIR RGLAVEDIEH ELQASQYQLA SFWGKPQASY YFNGDLLDMP
TVPSVDSQLT LLKQNPRFQQ FASAQRIAQS QMELARIEAK PQWQFTAGVR RYEASDDFGL
VAGVSIPWGT SDRNAGTIAA LHAQQDVLAN EQSALMQAQD AQLYVLLQEM AHSAHVIDTV
RNSIVPTLEK ALSEASNAFD KGQLSYNQFN DVYRELLSAQ YQLLDAFESL HLQHIEIQRL
TGTSISQ
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