Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3948 |
Symbol | |
ID | 5081431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4593046 |
End bp | 4594074 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640501162 |
Product | hypothetical protein |
Protein accession | YP_001185452 |
Protein GI | 146295028 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.681291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTATA TAACGGAAGA GCGGTTGTCA ATTTACAGCA AACACCTGAA AGTTAAAAAA GAGGCTGAGC TCGCAGCCTA TCACTGGAAT ACAGCTCTTG CCGGTGCTCT GTTTCCCGCA ATACAGTGTC TCGAAGTTAC TTTGAGGAAT GCAATAGTTC AAGCTGTACA GTCTAATCCC CCTCCCGCGG CAAAAGGATT ATACAGCACA GGGCCGGATT GGATTTTTTC ATTTACTGAG TATATGGGAA AACGAAAAAT ACCTGCATAC AAGCGATTCA CTAAGGCAGG ACGTGCAGGT GAGGCTAGAG ACGCCAATGG CTATGTTCTG ATGCCGAATG GTGAACGGAA AATCGTAGAG AGGTTGTGGG AAGAGAAGAA AGTAATCGAT GCGAAAAAAA AGCTTAAAAC AGCTGGTAAG GATGCTACAC CCGATAGAGT GATTTCTAGC ATGGACTTTG GATTCTGGAC CAATTTCTTG TCGAAAGAAT ACGAAGATCA TCAGTCAAAA ATGCTTTTGT GGCCAAATTT GCTAGGGATA GTTTTTCCAA ACGCTCCGCA AGGAACAAGT CGGCAGGATA TTGAAAGTGA ATTTAACAGA GTAAGGGAAC TCCGCAACCG ACTTACTCAT CACGAAGCTA TTTGGAAGTT TTTTTATGAC AACCCAGCTA CTGGTAAGCC AGATTACAAT CGTCCTGTTT ATGGATCAAA TGCAAGTTGC TCGCTGCTTC TTAAACATTT TGAAGATTTG TTAAAGTTAA TTGGTTGGAT GAGCAATGAA ATACATGATG ACTTTATTAA ACATCAAGGC GACGTTAGAT TCAGAGCTTT ATGTACGATC GATGGACTTA ATAGCTTTGT AGACCCTGAT AAGGTAACAA ATGTGTTAAC TATCAATAAA GGGGGATGGG GATTAAAAAG AGCCGTAGAA CATCTAAATA ATGGAAAGAT ACTAAGAATT ACCCGTTTAG GAAGTAGCGT AGTCACTATT GGTAAGGACT TCAACAGAAG TTTCGACAAT GGAAAATAG
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Protein sequence | MKYITEERLS IYSKHLKVKK EAELAAYHWN TALAGALFPA IQCLEVTLRN AIVQAVQSNP PPAAKGLYST GPDWIFSFTE YMGKRKIPAY KRFTKAGRAG EARDANGYVL MPNGERKIVE RLWEEKKVID AKKKLKTAGK DATPDRVISS MDFGFWTNFL SKEYEDHQSK MLLWPNLLGI VFPNAPQGTS RQDIESEFNR VRELRNRLTH HEAIWKFFYD NPATGKPDYN RPVYGSNASC SLLLKHFEDL LKLIGWMSNE IHDDFIKHQG DVRFRALCTI DGLNSFVDPD KVTNVLTINK GGWGLKRAVE HLNNGKILRI TRLGSSVVTI GKDFNRSFDN GK
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