| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3821 |
|---|
| Symbol | |
|---|
| ID | 5081155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 4433183 |
|---|
| End bp | 4433599 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640501033 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_001185326 |
|---|
| Protein GI | 146294902 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC GCATACTTTT TCTCTGTGTT GGAAATTCGG CACGTTCGCA ACTCGCTGAA
GCCTTGTTAA AACATCAAGC ACAAGATCTG TTTGAGGTAT TTAGCGCGGG GACTGAGCCA
GAGCCGATAG ACGAACGAAC CTTATATGTT TTGCAGAAAA ATAATCTAGA CACGAGCGAA
TTACGTTCTA AATCTGTCAA TGAATTCAGT GGGCAATCCT TTGATTTTGT GATCAGCCTC
TGTGAAAAAT CCACGCAAGA ATGCCAGAGT TTTCCCTTAG CAGATAAGAT TATTGCTTGG
GATTATCCCG ATCCCAGAAT AGAATCGGGC ACTCGTGGGT TTGAACAAAC TTTTAGAGAA
CTCAACGAAA GAATAAAAAT GTTTGTACTC GTTCAGTCTA AGGATCTTAA TGATTAA
|
|---|
| Protein sequence | MKKRILFLCV GNSARSQLAE ALLKHQAQDL FEVFSAGTEP EPIDERTLYV LQKNNLDTSE
LRSKSVNEFS GQSFDFVISL CEKSTQECQS FPLADKIIAW DYPDPRIESG TRGFEQTFRE
LNERIKMFVL VQSKDLND
|
|---|
| |