Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3816 |
Symbol | |
ID | 5081150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4430418 |
End bp | 4430909 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640501028 |
Product | dual specificity protein phosphatase |
Protein accession | YP_001185321 |
Protein GI | 146294897 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCACATC CATTTGATAT TTTGTCTTTA GACAGTGGTG CTCGCTTAAT TTTCACCCCT TGTCCTGGGA CTAAATCTGC CCCTGTAGCA GAGGCGGTGG CGACACTTAA AGCTGCGGGG ACTGAAGTTA TCATCACCCT GATGCCGCTT GGTGAATTGC ACACCTTTGG CGCCACCTCA TTGCCTGATA TTTGTCGTGA AACGGGGATC CGTTGGCTGC ATTTACCGAT AGAAGACGAT GCGTCGCCCG CAGAGGAGTT TGAGTTAGCC TTTGCAAAGC ACAGGGCAGA GCTACTTGCC TTGATGCAAA ACAAAGCGAC GATTGCGATT CATTGTCGTG GTGGTTCAGG ACGCACGGGA TTAATGGCGG CAATTCTGTT GTTACTAGCG GGAGGCTCCT TGAGTGAAGT GATTACCCAA GTGCAATCGA TTCGTCCTAA CGCCTTAACG AATGTGCATC AGCGCAGCTA TATCGACCAG TTAACGCTTT AG
|
Protein sequence | MSHPFDILSL DSGARLIFTP CPGTKSAPVA EAVATLKAAG TEVIITLMPL GELHTFGATS LPDICRETGI RWLHLPIEDD ASPAEEFELA FAKHRAELLA LMQNKATIAI HCRGGSGRTG LMAAILLLLA GGSLSEVITQ VQSIRPNALT NVHQRSYIDQ LTL
|
| |