| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3628 |
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| Symbol | |
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| ID | 5078918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4227556 |
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| End bp | 4228428 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500834 |
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| Product | hypothetical protein |
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| Protein accession | YP_001185135 |
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| Protein GI | 146294711 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.458062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAG CATTGACCTT AGTCATTATG GCGGCTGGGT TAGGTAGTCG TTTCGGCGGA
GACAAACAAT TGGCGGCCCT AGGGCCAGCG GGTGAGCCGA TGTTGGTTCT GTCGATTATG
TCTGCCATTC GAAGCGGATT TAATCGCGCG GTCTTAGTGA TCCGTCCTGA GTTAGCGCTT
GAATTAACTG AGATATTGAC GCGGTTTTTA CCTGCCAATT TCGAGTATCA TTTTTGCTAT
CAAGCTTTAA CAGACCTGCC AGAAGAGGCG CTGCTAACGG ATACAAGTCA TCGGCTTAAA
CCTTGGGGGA CAGCGCATGC GCTTTGGTGC GCCCGTCATT TAGTTAAAGG GCCAATGGCG
GTCATCAATG CCGATGATTT TTATGGCGAC AGTGCATTTG CTGCATTAGC AAAAGGCCTA
AGCGTAAAAC CTACGCAATG GATGATGGTG GCTTACCCCA TAGCACTCAC TCTGTCGGAA
CATGGCGGTG TTAACCGTGG TCTATGTCAA GTTGAGCGTG GGCAGCTTAA GTCCGTTGTC
GAATGGCTGA ATATCAAGGC TTGTGAAGGG GTATTGATGG GCGATGGGCC ACAGGGATTG
ACGATATTAC CTGACCAGCC CTTAGTTTCA ATGACATGTT GGGGCTTTTC ACCCAGCATT
TTTGATGTTA TTAAGCATGA ATTAAGTCAA TTTATTGCGC TGGAAGGCCA GCAACCTAAG
TCTGAATGTT ATCTACCAGC CGTGGTACAA GCTGGGATTG AGCAAGGTGT CGCTGTTTGT
GTTGATATTG CCTCAGAGCC TTGGCTCGGT GTCACCTATC CGCAGGATAC TGTCTGGGTA
AAGCAAAAAT TAGTGGAGTT ACTGAGTGAT TAA
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| Protein sequence | MNTALTLVIM AAGLGSRFGG DKQLAALGPA GEPMLVLSIM SAIRSGFNRA VLVIRPELAL
ELTEILTRFL PANFEYHFCY QALTDLPEEA LLTDTSHRLK PWGTAHALWC ARHLVKGPMA
VINADDFYGD SAFAALAKGL SVKPTQWMMV AYPIALTLSE HGGVNRGLCQ VERGQLKSVV
EWLNIKACEG VLMGDGPQGL TILPDQPLVS MTCWGFSPSI FDVIKHELSQ FIALEGQQPK
SECYLPAVVQ AGIEQGVAVC VDIASEPWLG VTYPQDTVWV KQKLVELLSD
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