Gene Sputcn32_3596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3596 
Symbol 
ID5078832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp4188070 
End bp4188780 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content41% 
IMG OID640500798 
Producthypothetical protein 
Protein accessionYP_001185103 
Protein GI146294679 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGAACG GCAGACTTGA TTATAAAGAT TCATTATTGC GAGTCTGCCG CTTTAGTCTA 
ATAGCGTCAG CCCTAGGGAT CTGTTGTCTC TATGCTGCGC CAACACAAAC CCTTGATGAA 
ACTAAAATAA CCTCAACTCT GGTTAAACAT TATGGCGAAC GTGCAGGCAT GCGTGCCAAA 
GCGTGGTTTA AGGTTTTATC TGAAGCAAGT ACGTTAGATG AAAAAGAAAA ACTGTTAAAA 
GTGAATAACT TTTTTAATTT ATTTCGTTTT GTTGATGATA TAAAACTGTG GGGAGAGTCG 
AATTATTGGG CGACTCCAAT GGAATTTATT GGTGTCAATG GGGGGGATTG TGAGGATTTC 
TCGATTGCAA AATACTTCAC TTTACTCCAG TTAGGCGTAC CAGAAGATAA GATGCGAATT 
ACTATGGTAA AAGCAACCAG TGTCAATCAA TACCACATGG TATTGGCTTA CTATGAAACG 
CCCTCAGCCG TACCCTTAGT ACTCGATAAT CTCGACCATG AGATAAAACC AGCGACAAAA 
CGGAAAGATT TATTACCCGT TTATAGCTTT AACGGTAAAC AACTATGGCT TAACAAAGAA 
CAAGGACGAG GTGTGTTAGC GGGTTCCTCT ACGCGACTCG AAAAATGGAA TGACCTCAAC 
CACAGATTAG GTGTTGACCG TCTCAGGCAA CCTAAATTAA AACTGGAGTA G
 
Protein sequence
MMNGRLDYKD SLLRVCRFSL IASALGICCL YAAPTQTLDE TKITSTLVKH YGERAGMRAK 
AWFKVLSEAS TLDEKEKLLK VNNFFNLFRF VDDIKLWGES NYWATPMEFI GVNGGDCEDF 
SIAKYFTLLQ LGVPEDKMRI TMVKATSVNQ YHMVLAYYET PSAVPLVLDN LDHEIKPATK 
RKDLLPVYSF NGKQLWLNKE QGRGVLAGSS TRLEKWNDLN HRLGVDRLRQ PKLKLE