| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3330 |
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| Symbol | |
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| ID | 5078105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3877984 |
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| End bp | 3880137 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640500531 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001184841 |
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| Protein GI | 146294417 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAAGG ATGACTTTCC TAAATACTTT GACTCTCCTA AAAATTTTTA TTTCAGCGTC
CTAAGTTCCA GTTGGATGGT GATCACGGCT GCATTGTTTT TCATGGGCGT TTCTTGGTAT
GTCTTAGAGG TATATCTTAG AGATCGCGGA GAAGAGCGTT TTAATAATAA TGTGCAGGAG
CTAATTGAAG CCGTAAACAG CAGAATGATA GTGTATGAGC AGGTATTACG GGGGGGGATT
GGGTTATTTC TTGCCTCTGA TGGCGTGACC AGAGAAGAGT GGCAGACCTA CGTAGTAAAT
GCGCGTTTGA TTGAATATTA CCCAGGTATT CAAGGCTTTG GTTACACTCC CTTACTGACT
CCTGAAACCT TGGAGGCGCA TGTCAATCAA GTTCGAACTG AAGGGTTTAG TGAATATAAC
GTTTATCCCC AAGGAGAGCG CGATCTCTAT TGCGTCATTC AATACTTAGA GCCCTTTGAT
TGGCGTAACC AGAGGGCTTT TGGTTTTGAC ATGTGTTCAG AGACGAATCG ACGCTCTGCC
ATACTCAGTT CTATAGCAAC AGGGATGCCG ACAATTTCAG GAAAGGTGAT ATTAGTTCAG
GAAACCCAAG ATAATACCCA ATCGGGTTTT TTGATGTATT TACCCTTATA TCAAGGGCAA
GCGACTACTG ATGAGGAGCG AAAACAGCGT GCCGTCGGTG TAATTTATGC AGCTTTTCGC
ATGGATGATT TGATGCAAGG GATTATGGGA AATAGATTTT CGGGTTTAAC ACTCGCTATT
TACGATGGGG AAAATGCAAA CGCTGAAAGT TTAATGTTTA CTAGCAATAA ATTGTTACCT
AGTCCGCAGG ATCTTTTTTA TCAATCACAA ACGGCAATCA TTGAAGGCCG AGTATGGCGT
TTAGATATTT CGTCAGAATC AGCCTTTATT TCTAGTTCGG AGCAAACCCA GAGTTTTTGG
CTCCAATTGA TTGGGTGCGG CTTTATATTA GCGTTATTTT ACTCCGTGGT TGTGATGGCG
CGTAATCGTT ATCAAGAATC TAGGTTGACA TCTGAACTTA TCGCCAACGA GAAACGATTT
AGATTAGTCA TTGAAGCCTC ACCAAGCGCC CTATTTATGA TTGATAGAAC AGGCGTGATC
ACTTTAGTCA ATACTCATGC CGAACGCTTA TTTGGTTATG CCAGAGAAGA ATTGCTTGGG
CATTCAATCA ATATGCTACT GCCTAAGGGA TTGTGGGATA TACATCAGCA GCATATGAGT
AATTATTTGG TCCAGCCTAT CGCAAAAAAT ATGTCTATGC GGGACGATTT ATTTGGCTGT
TGCAAGGATG GTAGCCGATT AGCGATTGAG GTTGGCTTAA CACCAATCCA TTTTAGTAAT
GGGCTCTCTA TACTCGCGAC AATCAATAAT GTGTCAGAAC GCAAACGTGT GGAAATTCAA
AGAGCTCAAC ATACAAAAGA ACTTGAGCGT ATTAATCAAG AACTCGATCG TTTTGCCTAT
ATTGCATCCC ATGATCTTAA GTCTCCTTTA AGGGGGATTG AACAGTTGAC GAGTTGGTTG
GCGGAAGATC TTGTTGATAA TACGAATGAA AATGTCCAAA AGTACTTAGG ATTAATTCAA
AATCGGATTC ATCGCATGGT CTTGCTACTC GATGGATTAT TAATGTTTTC CAGAATTGGT
CGGGTTGATG CTGAAATTGT AGAGGTAGAT GCGCGGCAGT TAATTGAGGA TATGTTTGAG
TTAGTCGCTC CTCCACAGGG ATTTGAGTTA TTGCTAGAGG GGGAATTCCC AAACTTTAAG
ACAGTCAAAA CACTTTTGGA GTTGGTTGTT AGAAATTTAA TGAGTAATGC CATAAAACAC
CACGATCGAG ACACGGGTGT TATCAAAGTG CAATGTGAAC CCAAAGGGGA TGTATATTGG
TTTAGTGTTG TTGATGATGG CCCAGGTATT TCAAAGGCTT ATCATGGGAA AGTATTTGAA
ATGTTTCAGA CGCTTAAACC AAGGGATGAA GTAGAGGGGA GTGGTTTAGG TTTATCACTG
GTAAAAAAAA CCATAGAAAG CTTAGGGGGA GAAATCAAAC TAGAATCAGA GGGACGAGGT
TGTCGTTTTC GATTCAGTTG GCCAGTACGT ATAGTGAACA AGGAGGTTTT ATGA
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| Protein sequence | MHKDDFPKYF DSPKNFYFSV LSSSWMVITA ALFFMGVSWY VLEVYLRDRG EERFNNNVQE
LIEAVNSRMI VYEQVLRGGI GLFLASDGVT REEWQTYVVN ARLIEYYPGI QGFGYTPLLT
PETLEAHVNQ VRTEGFSEYN VYPQGERDLY CVIQYLEPFD WRNQRAFGFD MCSETNRRSA
ILSSIATGMP TISGKVILVQ ETQDNTQSGF LMYLPLYQGQ ATTDEERKQR AVGVIYAAFR
MDDLMQGIMG NRFSGLTLAI YDGENANAES LMFTSNKLLP SPQDLFYQSQ TAIIEGRVWR
LDISSESAFI SSSEQTQSFW LQLIGCGFIL ALFYSVVVMA RNRYQESRLT SELIANEKRF
RLVIEASPSA LFMIDRTGVI TLVNTHAERL FGYAREELLG HSINMLLPKG LWDIHQQHMS
NYLVQPIAKN MSMRDDLFGC CKDGSRLAIE VGLTPIHFSN GLSILATINN VSERKRVEIQ
RAQHTKELER INQELDRFAY IASHDLKSPL RGIEQLTSWL AEDLVDNTNE NVQKYLGLIQ
NRIHRMVLLL DGLLMFSRIG RVDAEIVEVD ARQLIEDMFE LVAPPQGFEL LLEGEFPNFK
TVKTLLELVV RNLMSNAIKH HDRDTGVIKV QCEPKGDVYW FSVVDDGPGI SKAYHGKVFE
MFQTLKPRDE VEGSGLGLSL VKKTIESLGG EIKLESEGRG CRFRFSWPVR IVNKEVL
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