| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3229 |
|---|
| Symbol | |
|---|
| ID | 5080070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3757379 |
|---|
| End bp | 3757975 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640500426 |
|---|
| Product | glutathione S-transferase domain-containing protein |
|---|
| Protein accession | YP_001184740 |
|---|
| Protein GI | 146294316 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTGC TGTGCTCTCA GGCATCCCCC TATGCCCGCT GCGTTAGAAC GCTAATTCGT
TATTTAAATA TTAAGGATAT TGAAGAAGTT ACTGTAAACC CCTTTGAGAA TACCGCTGAG
TTGCTTGATG CCAATCCACT AGGCCAAATC CCGTGTCTTA TCACGAATGA TGGTATACCT
CTGTATGATA GCGAAGTGAT TATGCGTTAT TTGGATGCTG AACTTGGCGA ACAACATATG
TTTGGTGTGC CCAATAGTCA TTGGGTATTG CAGTGCCAGT TCTCTATGAT AAAAGGATTG
ATCGATAGCG CGGTAAAATT ACGTCAAGAG CAAATGCGTG AAGATGAAGG TTTGAGATCA
GTCTTTTGGA CATCGCGATT TGAACAGGCG TTGCTCCGCG GTTTAATGCA GATGGAGCAT
CAAAGTGTAA TCACCCAAGC TACAGTGCAA GCGCCACAGT TAGCCTTAAT TTGCCTACTT
GATTATATGG ACTTTAGACA TCCAGAGCTT GATTGGCGAA AAGTTGCACC CGCTACGGCA
CTTTGGTTTA GTGACATGCG AGATTTACCT GCATTCGTTG AAACTCGTCC TCACTAG
|
|---|
| Protein sequence | MKLLCSQASP YARCVRTLIR YLNIKDIEEV TVNPFENTAE LLDANPLGQI PCLITNDGIP
LYDSEVIMRY LDAELGEQHM FGVPNSHWVL QCQFSMIKGL IDSAVKLRQE QMREDEGLRS
VFWTSRFEQA LLRGLMQMEH QSVITQATVQ APQLALICLL DYMDFRHPEL DWRKVAPATA
LWFSDMRDLP AFVETRPH
|
|---|
| |