Gene Sputcn32_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3221 
Symbol 
ID5080062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3748180 
End bp3748812 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content48% 
IMG OID640500418 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001184732 
Protein GI146294308 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.112317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG CAATTTTAGG TGCAACAGGT TGGATTGGTG GTGCAATTTT AAAAGAAGCA 
CTAAGCCGAG GGCATGAAGT CACCGCACTG GTTCGTGATC CAAGTAAATT ACCAACAACG 
AATGCGGCAG TGCGTACCGT GGATTTAAAT CAGCCACTTG TTGCTGATAG CTTTACCAAT 
CAGGATGTCG TGATCGCCGC GATCGGTGGC CGTGCCGCAC AAAACCACGA AATAGTGGCG 
GGAACAGCCA CTCATTTATT AGCAATATTG CCTAAGGCCA AAGTGCCGCG TTTATTATGG 
GTGGGTGGTG CAGGGAGTTT AGAAGTCGCA CCGGGTGTAA CTTTAGTATC AACCCCTGAT 
TTTCCCGAAG CTTACAAGAG CGAAGCATTA GCGGCGGTTG AAGCATTAAA GGTGTTTAGA 
GAAGCCAATA CAACGGTCAA TTGGACATTT GTTAGCCCTG CCGCTGAGAT TTACCCAGGA 
GAGAGTGAGG GCCCCTATCG TGTTGGTGGC GACAGTTTTT TTACCGATGC CAATGGTCAA 
AGCCGTATTT CGGTCACTGA TTACGCCAAA GCCATGCTAG ATGAGGCTGA AAAGGGCACT 
CACCCAAACC AACGCATCAG TGTGGCTTAT TGA
 
Protein sequence
MKIAILGATG WIGGAILKEA LSRGHEVTAL VRDPSKLPTT NAAVRTVDLN QPLVADSFTN 
QDVVIAAIGG RAAQNHEIVA GTATHLLAIL PKAKVPRLLW VGGAGSLEVA PGVTLVSTPD 
FPEAYKSEAL AAVEALKVFR EANTTVNWTF VSPAAEIYPG ESEGPYRVGG DSFFTDANGQ 
SRISVTDYAK AMLDEAEKGT HPNQRISVAY