| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3167 |
|---|
| Symbol | |
|---|
| ID | 5080110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 3687305 |
|---|
| End bp | 3688441 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640500364 |
|---|
| Product | peptidase M50 |
|---|
| Protein accession | YP_001184678 |
|---|
| Protein GI | 146294254 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1994] Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCCA AATTGGAACT ACTTAAGATT GACTGCTTAG GCAAACAACT GCGTTTAGAA
GGCTCCCTCG CAGGATGGCA GCAACTATTC TGGGACAACA ACTTAGTCTC ACAAAAATCT
GCCTCTATTG ATAATGGCGG ACTCAGAATA CATGAATTTG AACTCAGCCA ATTTAACAGC
CCACTGGTTA CCGAAGGCGG AGAACAAAGT TCCCTCGAAG CTAAAATCAT CATTCGTCTT
GAAACCGATT TAGTCTGGCA GCCATTTCGC TTCGATTATC GCCTGCTACA GGATGATGAA
GTCATAGCCC AAGGAACACG TACCGAAAAA GATATCGAAA GACAACATCC TGAAATCCCT
ATCGTTAAAC AACAAAAGTT AAGCATTGTT GGGCTGGCAT CCCTTGGATT TAAATTATTA
AAAAGTGCCA AAGTAATTAA AGTGGCACTA GCCGGAGCCA GTGTTGCTGC CTATTCTTGG
CTATTTTCGT TTCAGTTTGC ACTGGCATTG ATCGCCTGTT TAGTATTTCA CGAATACGGC
CATATCCGCG CGATGAAGTA TTTTGGGATG AAAACCAAGG GAATTTACCT GATCCCTTTT
ATGGGTGGGC TCGCTCTTTC CGATGAAAAA ATTAATACAC GTTGGCAAGA TGTCGTGATA
TCCATCATGG GGCCCACTTT TGGCTTATTC ATGTCTATAG GCTCATTGAT TGCCTACCAC
GCTACGGGCA ATGTGTTTTT TGCGGGGCTT GCAGCCTTTA ATGCTCTACT TAACTTGTTT
AATTTATTGC CTATTTTGCC ATTAGATGGC GGCCATATTT TAAAAAGTAT TAGCTTTTCA
ATGAACAGTG TAATGGGGCT TATCGCCTGT GCGGTAGGAG CCGCTTTTGG CGTTTATGTT
AGCTACACCT TTGGTTTAGC ATTACTCGGT TTTTTACTGT TAATAGGCAG TTTGGAAATT
ATCTTTGAAT GGCGAACTCG CCATCAAAGC CATTTACTAC CTCTCGATAG ATATGGGCAA
ATCTTCTCAA CTATCTGGTA TTTACTGACT GTCGGCGCCT TAGTAGGTAT TATCTGGCAC
TTAGCTGGAA CAGGTGACGA TATGCTTAGC CTGCCACTTA AGATACTGCA AAGCTAA
|
|---|
| Protein sequence | MEPKLELLKI DCLGKQLRLE GSLAGWQQLF WDNNLVSQKS ASIDNGGLRI HEFELSQFNS
PLVTEGGEQS SLEAKIIIRL ETDLVWQPFR FDYRLLQDDE VIAQGTRTEK DIERQHPEIP
IVKQQKLSIV GLASLGFKLL KSAKVIKVAL AGASVAAYSW LFSFQFALAL IACLVFHEYG
HIRAMKYFGM KTKGIYLIPF MGGLALSDEK INTRWQDVVI SIMGPTFGLF MSIGSLIAYH
ATGNVFFAGL AAFNALLNLF NLLPILPLDG GHILKSISFS MNSVMGLIAC AVGAAFGVYV
SYTFGLALLG FLLLIGSLEI IFEWRTRHQS HLLPLDRYGQ IFSTIWYLLT VGALVGIIWH
LAGTGDDMLS LPLKILQS
|
|---|
| |