Gene Sputcn32_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3118 
Symbol 
ID5078462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3625930 
End bp3626424 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content45% 
IMG OID640500315 
Producthypothetical protein 
Protein accessionYP_001184629 
Protein GI146294205 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCA CCCCCAATAT ACAAGGACAA TGTATGCAAA ATCCATCCAG ACTAGACGGC 
CAAATTTGGG ATTGGTGTGA TATGAGTTAT GGGCACAATA AAGCACTGTG CCTCGAATTG
CAGGATAGCT GCCAAGTGAA TGTTAACCTG CTGCTACTGG CGCAATATTT AGATCTCACG
CTTGATGTTA CAGGGCCAAG GCAATATAGC ACTGAGCAAT GGCAAACATT GACTGCCGCC
GTAAAGGAAT GGGATGAGAA GTTTCTTTCT CCCTATCGCC GTTTACGTCG CCTTGCCAAA
GCAAGTCTGA ATAAAGATGA ATATCAGCAA ATGCTTGATG TTGAGTTGAT GATGGAGCGT
AAGGCACAGC GCACCATCAC TTGTGCTCTG AGAAGGCTTA ATCCATTAGG ATTAAAGACT
AACCTAGTGA GCTACCTAAG TTTATTCGGG CTAGGCGAAG CCGATGTAAA ACAGTTAGCG
CTACTCACAC CTTAA
 
Protein sequence
MITTPNIQGQ CMQNPSRLDG QIWDWCDMSY GHNKALCLEL QDSCQVNVNL LLLAQYLDLT 
LDVTGPRQYS TEQWQTLTAA VKEWDEKFLS PYRRLRRLAK ASLNKDEYQQ MLDVELMMER
KAQRTITCAL RRLNPLGLKT NLVSYLSLFG LGEADVKQLA LLTP