Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3056 |
Symbol | |
ID | 5079798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3545145 |
End bp | 3545651 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500254 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001184568 |
Protein GI | 146294144 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGATAC ATGAATCTCA TCTCCAAGTT TATCCCACTG ATCTTGGCGA AAATGCTAAT TCAGACAATG CTTTATGTTT AGAGCATCAA GTGTGTTTCT CACTCTATAG TGCCGCCAAT GCGATGATAC GAGCCTACCG TCCTTTATTG GATAAGTTGG ATTTAACCTA TCCTCAGTAT TTGGTGATGC TAGTGCTATG GGAAGAACAG GGGATCAGTG TTAAAACCTT AGGAGATAAA CTGTTTCTCG ATTCAGGCAC CTTAACACCT TTGCTTAAAC GTCTTGAATC GAAAGGATTA GTGCGCCGAG GTCGCAGTGA GTCAGATGAG CGGGTGCGAG TATTGGATTT AACGCCAGAG GGCATCGCAC TTAAATCTCA AGCGAGTGAC ATTCCCCATT TAATGCGTTG TAAAGTGGGG GGCGAGTTGA GTGAGCTTAA AGCCTTAAAA GCACTTTGTG ATAAAGCCCT TAAGCAATTA CATGCCAGTG TTGACCAAGA TATTTGA
|
Protein sequence | MPIHESHLQV YPTDLGENAN SDNALCLEHQ VCFSLYSAAN AMIRAYRPLL DKLDLTYPQY LVMLVLWEEQ GISVKTLGDK LFLDSGTLTP LLKRLESKGL VRRGRSESDE RVRVLDLTPE GIALKSQASD IPHLMRCKVG GELSELKALK ALCDKALKQL HASVDQDI
|
| |