More than 300 homologs were found in PanDaTox collection
for query gene Sputcn32_3056 on replicon NC_009438
Organism: Shewanella putrefaciens CN-32



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009438  Sputcn32_3056  MarR family transcriptional regulator  100 
 
 
168 aa  343  8.999999999999999e-94  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0866  MarR family transcriptional regulator  83.03 
 
 
165 aa  286  8e-77  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3426  transcriptional regulator, MarR family  83.03 
 
 
165 aa  286  8e-77  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3498  MarR family transcriptional regulator  82.42 
 
 
165 aa  286  9e-77  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3621  MarR family transcriptional regulator  82.42 
 
 
165 aa  285  2e-76  Shewanella baltica OS195  Bacteria  normal  normal  0.597701 
 
 
-
 
NC_008321  Shewmr4_0815  MarR family transcriptional regulator  82.35 
 
 
165 aa  270  6e-72  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.0000550088 
 
 
-
 
NC_008322  Shewmr7_3208  MarR family transcriptional regulator  81.7 
 
 
165 aa  266  1e-70  Shewanella sp. MR-7  Bacteria  normal  normal  0.469767 
 
 
-
 
NC_008577  Shewana3_3311  MarR family transcriptional regulator  81.58 
 
 
165 aa  262  2e-69  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0977  MarR family transcriptional regulator  77.58 
 
 
165 aa  259  8e-69  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_0578  transcriptional regulator, MarR family protein  71.33 
 
 
163 aa  207  4e-53  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0799  MarR family transcriptional regulator  73.05 
 
 
161 aa  206  2e-52  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0835  transcriptional regulator, MarR family protein  71.01 
 
 
150 aa  202  2e-51  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0628  MarR family transcriptional regulator  71.94 
 
 
144 aa  195  2.0000000000000003e-49  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001045  organic hydroperoxide resistance transcriptional regulator  68.57 
 
 
152 aa  193  1e-48  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3161  regulatory protein, MarR  72.52 
 
 
158 aa  193  1e-48  Shewanella denitrificans OS217  Bacteria  normal  0.0336123  n/a   
 
 
-
 
NC_009784  VIBHAR_04763  hypothetical protein  68.35 
 
 
143 aa  190  1e-47  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0934  MarR family transcriptional regulator  66.67 
 
 
163 aa  187  7e-47  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0232  MarR family transcriptional regulator  64.29 
 
 
152 aa  178  4e-44  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3331  MarR family transcriptional regulator  57.72 
 
 
155 aa  173  9.999999999999999e-43  Colwellia psychrerythraea 34H  Bacteria  normal  0.376124  n/a   
 
 
-
 
NC_008709  Ping_2313  MarR family transcriptional regulator  59.12 
 
 
147 aa  166  1e-40  Psychromonas ingrahamii 37  Bacteria  normal  0.708353  normal 
 
 
-
 
NC_011894  Mnod_4766  transcriptional regulator, MarR family  54.68 
 
 
166 aa  147  8e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.462626  n/a   
 
 
-
 
NC_009719  Plav_2251  MarR family transcriptional regulator  54.55 
 
 
145 aa  146  1.0000000000000001e-34  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.344689  normal  0.255238 
 
 
-
 
NC_010511  M446_4256  MarR family transcriptional regulator  52.59 
 
 
166 aa  142  2e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.973283 
 
 
-
 
NC_013170  Ccur_00880  transcriptional regulator, MarR family  60.36 
 
 
148 aa  142  2e-33  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3619  organic hydroperoxide resistance transcriptional regulator  52.63 
 
 
162 aa  141  5e-33  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5144  MarR family transcriptional regulator  48.57 
 
 
156 aa  141  5e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1742  MarR family transcriptional regulator  50.34 
 
 
149 aa  140  6e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3291  MarR family transcriptional regulator  52.27 
 
 
152 aa  140  8e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.570613  n/a   
 
 
-
 
NC_007908  Rfer_0573  MarR family transcriptional regulator  50 
 
 
151 aa  139  9.999999999999999e-33  Rhodoferax ferrireducens T118  Bacteria  normal  0.256198  n/a   
 
 
-
 
NC_008825  Mpe_A0057  MarR family transcriptional regulator  53.52 
 
 
185 aa  139  1.9999999999999998e-32  Methylibium petroleiphilum PM1  Bacteria  normal  0.584189  normal  0.103539 
 
 
-
 
NC_013421  Pecwa_1328  transcriptional regulator, MarR family  53.85 
 
 
149 aa  139  1.9999999999999998e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1134  MarR family transcriptional regulator  54.74 
 
 
144 aa  139  1.9999999999999998e-32  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0960  MarR family transcriptional regulator  53.28 
 
 
146 aa  138  3e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.305429  normal  0.461467 
 
 
-
 
NC_010001  Cphy_2661  MarR family transcriptional regulator  50.74 
 
 
145 aa  138  3.9999999999999997e-32  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00131118  n/a   
 
 
-
 
NC_009485  BBta_0108  organic hydroperoxide resistance transcriptional regulator  49.32 
 
 
152 aa  138  4.999999999999999e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.879191 
 
 
-
 
NC_007348  Reut_B5560  MarR family transcriptional regulator  55.12 
 
 
170 aa  138  4.999999999999999e-32  Ralstonia eutropha JMP134  Bacteria  normal  0.813118  n/a   
 
 
-
 
NC_012912  Dd1591_0401  transcriptional regulator, MarR family  53.08 
 
 
156 aa  137  4.999999999999999e-32  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2950  transcriptional regulator, MarR family  53.85 
 
 
149 aa  137  6e-32  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_21070  transcriptional regulator  54.55 
 
 
143 aa  137  7e-32  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0886  transcriptional regulator, MarR family  51.77 
 
 
161 aa  137  7.999999999999999e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.541526  normal  0.759862 
 
 
-
 
NC_007948  Bpro_0623  MarR family transcriptional regulator  53.08 
 
 
151 aa  137  7.999999999999999e-32  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0925  regulatory protein MarR  51.77 
 
 
195 aa  137  8.999999999999999e-32  Methylobacterium extorquens PA1  Bacteria  normal  0.101489  normal 
 
 
-
 
NC_010338  Caul_1306  MarR family transcriptional regulator  53.33 
 
 
149 aa  136  1e-31  Caulobacter sp. K31  Bacteria  normal  0.335381  normal  0.344824 
 
 
-
 
NC_012880  Dd703_0519  transcriptional regulator, MarR family  52.11 
 
 
157 aa  136  1e-31  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03887  transcriptional regulator MarR family  53.62 
 
 
152 aa  136  1e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0474  transcriptional regulator, MarR family  51.37 
 
 
155 aa  136  1e-31  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2137  transcriptional regulator, MarR family  46.04 
 
 
154 aa  136  1e-31  Methylobacterium populi BJ001  Bacteria  normal  normal  0.727084 
 
 
-
 
NC_008782  Ajs_0483  MarR family transcriptional regulator  51.37 
 
 
151 aa  135  2e-31  Acidovorax sp. JS42  Bacteria  normal  normal  0.0397178 
 
 
-
 
NC_009832  Spro_0129  MarR family transcriptional regulator  48.92 
 
 
154 aa  135  3.0000000000000003e-31  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2174  regulatory protein MarR  48.82 
 
 
154 aa  135  3.0000000000000003e-31  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.363681 
 
 
-
 
NC_003909  BCE_4558  MarR family transcriptional regulator  43.45 
 
 
150 aa  135  3.0000000000000003e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0519  MarR family transcriptional regulator  50.76 
 
 
150 aa  135  3.0000000000000003e-31  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00587381 
 
 
-
 
NC_011369  Rleg2_2845  transcriptional regulator, MarR family  53.54 
 
 
145 aa  134  4e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.648486  normal 
 
 
-
 
NC_008261  CPF_1208  MarR family transcriptional regulator  48.55 
 
 
143 aa  134  4e-31  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0011677  n/a   
 
 
-
 
NC_009636  Smed_0576  transcriptional regulator, TrmB  49.62 
 
 
158 aa  134  5e-31  Sinorhizobium medicae WSM419  Bacteria  normal  0.0950259  normal 
 
 
-
 
NC_011886  Achl_1207  transcriptional regulator, MarR family  52.11 
 
 
146 aa  134  5e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000193075 
 
 
-
 
NC_011757  Mchl_2452  transcriptional regulator, MarR family  45.32 
 
 
154 aa  134  6.0000000000000005e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.126734  normal 
 
 
-
 
NC_007925  RPC_3178  MarR family transcriptional regulator  51.15 
 
 
154 aa  134  6.0000000000000005e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.137994  normal  0.81725 
 
 
-
 
NC_013440  Hoch_1641  transcriptional regulator, MarR family  50.37 
 
 
157 aa  134  6.0000000000000005e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.176874  normal 
 
 
-
 
NC_008262  CPR_1032  MarR family transcriptional regulator  47.83 
 
 
143 aa  134  8e-31  Clostridium perfringens SM101  Bacteria  normal  0.119572  n/a   
 
 
-
 
NC_010678  Rpic_4745  transcriptional regulator, MarR family  46.9 
 
 
147 aa  133  9e-31  Ralstonia pickettii 12J  Bacteria  normal  normal  0.427221 
 
 
-
 
NC_012857  Rpic12D_3668  transcriptional regulator, MarR family  46.9 
 
 
147 aa  133  9e-31  Ralstonia pickettii 12D  Bacteria  normal  0.400003  normal  0.620653 
 
 
-
 
NC_007492  Pfl01_3980  MarR family transcriptional regulator  50.67 
 
 
153 aa  133  9e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.436486  normal  0.638371 
 
 
-
 
NC_013093  Amir_1966  transcriptional regulator, MarR family  50.37 
 
 
151 aa  134  9e-31  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000123545  n/a   
 
 
-
 
NC_008752  Aave_4271  MarR family transcriptional regulator  54.4 
 
 
156 aa  133  9.999999999999999e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0653897  normal  0.661065 
 
 
-
 
NC_014210  Ndas_1936  transcriptional regulator, MarR family  52.85 
 
 
155 aa  133  9.999999999999999e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.13089 
 
 
-
 
NC_009504  BOV_A0830  MarR family transcriptional regulator  51.94 
 
 
151 aa  133  9.999999999999999e-31  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0861  transcriptional regulator, MarR family  52.27 
 
 
161 aa  132  1.9999999999999998e-30  Methylobacterium populi BJ001  Bacteria  normal  normal  0.440211 
 
 
-
 
NC_004311  BRA0886  MarR family transcriptional regulator  51.94 
 
 
151 aa  132  1.9999999999999998e-30  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4364  MarR family transcriptional regulator  41.78 
 
 
150 aa  132  1.9999999999999998e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4200  organic hydroperoxide resistance transcriptional regulator  41.78 
 
 
150 aa  132  1.9999999999999998e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4211  organic hydroperoxide resistance transcriptional regulator  41.78 
 
 
150 aa  132  1.9999999999999998e-30  Bacillus cereus E33L  Bacteria  normal  0.151141  n/a   
 
 
-
 
NC_011772  BCG9842_B0649  transcriptional regulator, MarR family  42.76 
 
 
150 aa  132  1.9999999999999998e-30  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1196  MarR family transcriptional regulator  52.9 
 
 
155 aa  132  1.9999999999999998e-30  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_4699  MarR family transcriptional regulator  41.78 
 
 
150 aa  132  1.9999999999999998e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4585  transcriptional regulator, MarR family  46.51 
 
 
150 aa  132  1.9999999999999998e-30  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4603  transcriptional regulator, MarR family  41.78 
 
 
150 aa  132  3e-30  Bacillus cereus AH187  Bacteria  normal  0.221434  n/a   
 
 
-
 
NC_011773  BCAH820_4554  transcriptional regulator, MarR family  42.07 
 
 
150 aa  132  3e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_012850  Rleg_0926  transcriptional regulator, MarR family  51.61 
 
 
158 aa  130  6.999999999999999e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.493079  normal  0.487426 
 
 
-
 
NC_007511  Bcep18194_B2231  MarR family transcriptional regulator  52.8 
 
 
150 aa  130  6.999999999999999e-30  Burkholderia sp. 383  Bacteria  normal  0.106154  normal  0.474897 
 
 
-
 
NC_007778  RPB_3240  MarR family transcriptional regulator  51.91 
 
 
158 aa  130  6.999999999999999e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.715513  normal 
 
 
-
 
NC_009901  Spea_2621  MarR family transcriptional regulator  47.1 
 
 
154 aa  130  7.999999999999999e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  0.276728  n/a   
 
 
-
 
NC_010515  Bcenmc03_3662  MarR family transcriptional regulator  52.8 
 
 
150 aa  130  9e-30  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.485543  normal 
 
 
-
 
NC_008061  Bcen_4499  MarR family transcriptional regulator  52.8 
 
 
150 aa  130  9e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.148368  n/a   
 
 
-
 
NC_008543  Bcen2424_3865  MarR family transcriptional regulator  52.8 
 
 
150 aa  130  9e-30  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0792032  normal 
 
 
-
 
NC_010682  Rpic_3444  transcriptional regulator, MarR family  52.17 
 
 
153 aa  130  1.0000000000000001e-29  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0021  MarR family transcriptional regulator  55.37 
 
 
178 aa  129  1.0000000000000001e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4312  MarR family transcriptional regulator  49.58 
 
 
150 aa  130  1.0000000000000001e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4966  transcriptional regulator, MarR family  49.3 
 
 
153 aa  129  2.0000000000000002e-29  Variovorax paradoxus S110  Bacteria  normal  0.345847  n/a   
 
 
-
 
NC_012856  Rpic12D_3097  transcriptional regulator, MarR family  51.45 
 
 
153 aa  129  2.0000000000000002e-29  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1470  MarR family transcriptional regulator  47.79 
 
 
151 aa  129  2.0000000000000002e-29  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1203  transcriptional regulator, TrmB  50.72 
 
 
146 aa  129  2.0000000000000002e-29  Mycobacterium sp. JLS  Bacteria  normal  0.529625  normal  0.0362733 
 
 
-
 
NC_010552  BamMC406_3762  MarR family transcriptional regulator  56.76 
 
 
150 aa  129  2.0000000000000002e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  0.425599  hitchhiker  0.00135953 
 
 
-
 
NC_009439  Pmen_2629  MarR family transcriptional regulator  46.67 
 
 
160 aa  129  2.0000000000000002e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.8863  normal 
 
 
-
 
NC_010506  Swoo_3365  MarR family transcriptional regulator  43.79 
 
 
161 aa  129  2.0000000000000002e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  0.559351  normal  0.177926 
 
 
-
 
NC_008146  Mmcs_1176  transcriptional regulator, TrmB  50.72 
 
 
146 aa  129  2.0000000000000002e-29  Mycobacterium sp. MCS  Bacteria  normal  0.713709  n/a   
 
 
-
 
NC_008705  Mkms_1193  transcriptional regulator, TrmB  50.72 
 
 
146 aa  129  2.0000000000000002e-29  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3854  MarR family transcriptional regulator  49.62 
 
 
151 aa  128  3e-29  Pseudomonas putida F1  Bacteria  normal  0.113287  normal  0.119098 
 
 
-
 
NC_011365  Gdia_1670  transcriptional regulator, MarR family  47.89 
 
 
161 aa  129  3e-29  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.428433  normal 
 
 
-
 
NC_009439  Pmen_1910  MarR family transcriptional regulator  48.34 
 
 
152 aa  128  3e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.0578168  normal  0.331204 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>