| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2993 |
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| Symbol | |
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| ID | 5079888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3469370 |
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| End bp | 3470677 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500192 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001184506 |
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| Protein GI | 146294082 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCCG GCACTGATGA TTCCAACAGG GAAGCGAGTA AAGCCATGAT TAAAGATACT
AGCGGCCAAG ATACAGTACT TGTGCCATCC ACCACTAAAC GTCTTAAATT ACCTCTGTTA
ATTAGCGGCT GCGCCTTATT AGTTAGCGCC TTAGTGTGGG CAAGTTTAGG CTCTGATAGT
GTTAGCAAAT CCTTAAGCCG TAGCGATATC ACCACGGCAA CACTTTATGT GGGAACCTTA
ACCCGCGATG TGGCGACCAC AGGTAAAATT GTGGCGGCCA ATGCGCCGAT TTTGTATAGC
ACCGAAGAAG GTACAGTGAC CCTACTGAGT AATCCTGGCG ATACAGTCAA TAAGGGCGAT
GTGGTTGCCA AACTCGATAG TCCAAGACTC ACTAATCAGC TAGAGCAAGC CAAATCCGTA
TTAGCGGGCA TGGAAAGTGC GTTAGAGCGC GCTAAGTTAG ATGCGAGACG CGATCAATTA
CAAGCTTATC AAACCTTAGA TATGGCTACG GTCGATCTTG AGGCGGCCGA GCGAGAAAGT
CGTCGAGGTG AGCTGCTGAT TCAAAGCCAA CTTATTGGCC AGATTGATTA TGAAAAGGGC
AAAGATGATT TACACAAAGC CAAGCTGAAG TTTAAACATG CCGAGCAAGA AGTCGCGTTA
ACGAAAGATA CCTTAACTTT TGAGGTAAAA AATAAAGCCC TCGAAGTTGA ACGTCAAACC
CTCGCGGTGC GTGAACTAGA ACGCCAAGTC GAAGCCTTGA ATATTGTCGC ACCCGTTAAT
GGGATTATCG GCAACTGGAT CACCGAGCAG AAAACCCGTC TTAGTGCCAA CCAACCGATT
TTAACCGTCG TGGATTTAAG CGCCTATGAA GCTGAGTTGG CCGTGCCAGA AAGCTATGCC
GACGATTTAG GTTTAGGTAT GGAAGTCGAG TTGAGTTTTG GCAGTATTAA GTTAATGGGC
AAGTTATCGT CGATTTCCCC TGAAGTGCGT AACCGTGAAG TGACCGCAAG GGTGCAATTT
GATCAAAATG ACAGCCTGAA ACTGCGTCAG AATCAACGTA TCTCGGCCCG AGTGTTATTA
GAGCACAGAC CCAATGTACT GATGGTAAAA CGCGGCGCCT TTATGACCAG CGGTGGCGGG
GAGGAAACTT ATCAAGTCGA AGGCGATTTA GCGACCCGCC GTGCGATAAA ACTGGGTAGT
ACGAGCCTGA GCCAAGTGGA AGTTCTGGAT GGCGGTAAAG CGGGAGATGA GTGGGTGATC
TCAAGCCTCG ATCCCTTTAA TCGTGCTGAG CAGGTAAGAA TGAACTGA
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| Protein sequence | MRSGTDDSNR EASKAMIKDT SGQDTVLVPS TTKRLKLPLL ISGCALLVSA LVWASLGSDS
VSKSLSRSDI TTATLYVGTL TRDVATTGKI VAANAPILYS TEEGTVTLLS NPGDTVNKGD
VVAKLDSPRL TNQLEQAKSV LAGMESALER AKLDARRDQL QAYQTLDMAT VDLEAAERES
RRGELLIQSQ LIGQIDYEKG KDDLHKAKLK FKHAEQEVAL TKDTLTFEVK NKALEVERQT
LAVRELERQV EALNIVAPVN GIIGNWITEQ KTRLSANQPI LTVVDLSAYE AELAVPESYA
DDLGLGMEVE LSFGSIKLMG KLSSISPEVR NREVTARVQF DQNDSLKLRQ NQRISARVLL
EHRPNVLMVK RGAFMTSGGG EETYQVEGDL ATRRAIKLGS TSLSQVEVLD GGKAGDEWVI
SSLDPFNRAE QVRMN
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