| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2944 |
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| Symbol | |
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| ID | 5078171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3415194 |
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| End bp | 3416510 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640500144 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001184458 |
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| Protein GI | 146294034 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.477524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTAT CCGGTGTTGT CATGACCTTC TCCGAATTTT CGTCATCCTC TGAGTCACTC
ACTTTTACCA AACTTGGCTT AAATTCGGCC TTGATTAAGG CATTACCTGC GATGCTGCAG
TGTCCTACTC TGGTACAGCA ATTGGCTATT CCTGCCATAT TAGCGGGGCG TGATGTGTTA
GCGTTGGCGC AAACGGGGAG TGGCAAGACC TTAGCATTTG GTCTGCCCTT ATTGCAGTCG
GTTTTAGAGC AGCAGGCTCA AGCACTGATA ACGGCTCAAG CATTGGTACT CGTGCCAACA
AGAGAGTTAG CGCAACAAGT GACCTTGGTA CTGCAAGCTG TGGCGCAGCC TTTGTCAGGG
GCGATGAAAA TTCAAACCCT TTGCGGTGGC GTGGACATCG ATAATCAATT AATTGAGCTT
GCAGAGCGGC CTCAGATTTT AGTGGCAACC CCTGGGCGTA TACTGGATTT ATGTAAGCAA
TCCCACATTA CCCTCGACTC GATAAAGCAC CTTGTTTTGG ATGAGGCAGA CCGTCTATTG
GAAATGGGTT TCTGGCCTGA TGTGCAAAAG TTGATTGCGT TGATGCCCAA ACATAAGCAA
ACCTTACTTT TTTCAGCCAC GCTGCCCGAG GCTTTGGATA CATTGGCGAG TCAATTGCTG
ATCAATGATC CATTACGCGT TCAAGCCCAC AAGGCTAATT CAGTCGTCCC CCATATTGAA
GAACAGCTCT ATTTGGTGAA TAAGGGCAGT AAAACACAGG CATTGATTGC CCTGCTAAAA
CAATATCAAT GGCCGCAGGT GCTGGTGTTT ATTAGCGCCC GTGATGATGC TGATGCGGTC
GCTAAACGGC TAGCAAAAGC GGGGATGAAA GTCGCTGCAC TACACGGTGA GAAAGATCAA
ACGGTGCGTA GCCAAACTTT GGCCGACTTT AAAGCCAAAC GCATTCAAAT ATTAGTGGCG
ACAGATTTGA TGGCGCGCGG CATTCATATC GATGCCTTGC CTGTGGTGGT CAATCTTGAT
TTGCCCATGA GTGCGCCTGT GTATGTACAT CGAATCGGCC GTACTGCGAG AGCGGGTACC
AAAGGGCTGG CGATTTCCCT TGTATGCCAT GGTGAAATGG CAACCTTAAC AACGATTCGC
GGTTTAACCG AGCGAGCGTT ACCGCTGACA TTATTGGCTG ATTTTCCGGT AACAGATAAG
CCGAGTGAAC AAGCCAGTGA TGGTAAGGTT GAACGTAAGC GGCCACCGCG GGATAAACAG
GCCAACCGCC GTAGCATAAA TAAGCACAAG GCTAGCGAGT TTAAAGGTAA ACGCTAA
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| Protein sequence | MFLSGVVMTF SEFSSSSESL TFTKLGLNSA LIKALPAMLQ CPTLVQQLAI PAILAGRDVL
ALAQTGSGKT LAFGLPLLQS VLEQQAQALI TAQALVLVPT RELAQQVTLV LQAVAQPLSG
AMKIQTLCGG VDIDNQLIEL AERPQILVAT PGRILDLCKQ SHITLDSIKH LVLDEADRLL
EMGFWPDVQK LIALMPKHKQ TLLFSATLPE ALDTLASQLL INDPLRVQAH KANSVVPHIE
EQLYLVNKGS KTQALIALLK QYQWPQVLVF ISARDDADAV AKRLAKAGMK VAALHGEKDQ
TVRSQTLADF KAKRIQILVA TDLMARGIHI DALPVVVNLD LPMSAPVYVH RIGRTARAGT
KGLAISLVCH GEMATLTTIR GLTERALPLT LLADFPVTDK PSEQASDGKV ERKRPPRDKQ
ANRRSINKHK ASEFKGKR
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