| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2916 |
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| Symbol | |
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| ID | 5078142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3380920 |
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| End bp | 3382266 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500117 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001184432 |
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| Protein GI | 146294008 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.615087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGT TGACCATTCA GGCGTACATT AATGGCCAAT GGAGCGATAT TGCACAGCTC
TCATTCCCTG AGAGCGAACA AGGTAATTAT CGGCTTACCT CGTTAGATTA CGAGCAAACA
TATGCATTAG CTGAGCTAGA TAAAGACGAC TTGCACGCCG TCTCGCTAAA CCATCCTGTT
AGCCTTTTTT TCGACGATCT AGGTAGACCA GGATGGTTAC GCTTTCTTGA TGACATCATG
CCTAGCGGTG CAAGCCGGCG CTATTGGCTT AACTATTTAG ATATCGCAGA CCTGACCTTA
GACGAGCAAA ATTTTGTACT TTTGAAGTTT GGGACCATCG CTCCTGTGGG GAATTTGAGG
GTAAAGGAAT CTTTGCCTAA GCGCACCGCT ATCGCTGATA CACTGAAATT CACCGTAGAC
GACGTTAGGA ATCGAGCTGC TGACTTTTTG GATTATGCAC AACATCAAGG CGCTGCCGCT
GGTGGCGCAA CAGGGGCTGG CGGCGAAGCG CCCAAGCTTT TGTTACGTTG CGACGATGAA
CAAAATATCT GGATTGATAG CTATCAAGAC GAACCGCAAA ACCGTGACCT TCATTATCTG
GTGAAATATC CAAGAGGCGC TCGGTTGCCT ATTGACTGCG ATATATTACG CGCGGAATAC
CACTATTATC ACGAATTGGC TGAAATGGGC TTTGAGACCA TTCCTACGGC TAATATGCGG
CTTGAAGAAG GCCATTCCTA CCCATCGCTA TGGTTGCCGC GCTTTGATAT TTACTTCAAC
GAACTAGGCC AGCAACGTTA TGCGATGGAG TCGGTCTATT CGATTTTGGG TAAAGGCGCG
GGCGTTACCT TAGATCATGA GCAAACCATA AGAGCGTTGA TCGATAAAAT CACTCATAGC
CATATGGTCT TAGAGCAAGG TTATCAGTTT GATGTGCGTG CTTTTGTCAT TGAGTGGGTG
CGGCGAGACT TACTCAATAT CCTATTTGGC AATAGTGATA ATCACGGGCG CAATACCGCG
TTTCTTAGGG GCGATGGTTG GATAAGGCTT GCGCCTATCT ATGACTTTGC ACCAATGAAA
GCTGACCCTG AAGGCATAGC CAGAACCACA AAGTGGGAAG CCCCGCTCGA AATAGGGGGG
GAGTATGATT TCCAGAGCAT TGCTGAGGCA TTAGCTGATT TGGTGCCTGC TCAGGAGCTA
CTGGCAGAGT TAAAACGTAC AGCACAGCAA TGCCTTGGCT TAGAGCAACG CTTAATAGGG
CGTGGTGTGC CACAGCGCAT TATCGACATG CCAGCAATTG GCTTTGCTTA CCTCGAAGAC
AAACTAACGC GTTGGGGATT GGTATGA
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| Protein sequence | MEQLTIQAYI NGQWSDIAQL SFPESEQGNY RLTSLDYEQT YALAELDKDD LHAVSLNHPV
SLFFDDLGRP GWLRFLDDIM PSGASRRYWL NYLDIADLTL DEQNFVLLKF GTIAPVGNLR
VKESLPKRTA IADTLKFTVD DVRNRAADFL DYAQHQGAAA GGATGAGGEA PKLLLRCDDE
QNIWIDSYQD EPQNRDLHYL VKYPRGARLP IDCDILRAEY HYYHELAEMG FETIPTANMR
LEEGHSYPSL WLPRFDIYFN ELGQQRYAME SVYSILGKGA GVTLDHEQTI RALIDKITHS
HMVLEQGYQF DVRAFVIEWV RRDLLNILFG NSDNHGRNTA FLRGDGWIRL APIYDFAPMK
ADPEGIARTT KWEAPLEIGG EYDFQSIAEA LADLVPAQEL LAELKRTAQQ CLGLEQRLIG
RGVPQRIIDM PAIGFAYLED KLTRWGLV
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