Gene Sputcn32_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2848 
Symbol 
ID5078682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3309077 
End bp3309895 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content43% 
IMG OID640500044 
Producthypothetical protein 
Protein accessionYP_001184366 
Protein GI146293942 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5266] ABC-type Co2+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000067409 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC GTCTGATTGC ATTATTCACC TCGCTCTGCA TTAGCCCTTT GGCAAGCAGC 
CATGACAGAT GGATTCTACC TAGCCATTTT AATGTTTCCG CCGAAAGCCA AGAGGCTGTG
TGGATCACTT CCGATGTGTC GGCCAGTAAT CAAGTTTTTA TGATGGATAA ACCTTATACT
GCCAGCGATG TAAGGGTATT ACAGCCCAAC GGAAAATCAA CGTCTCCCAG TTCAAGTTAC
ACGGGAGGGC GTAAATCGGT GTTCGATGTG CAGTTAACAC AAGATGGTAC CTATAAGTTT
GAAAAAGAAG TATCTCCGCG TTATTTTTCT CAATATAAAG TCAAGGGAAA GGAGGGCGTT
GTCCGTAGTC GCTTAGATAA AAAATCAACG GCAGCGGCTA TGCCTAAAGG GGCCTATGAT
CTTGAAAGTG CCTTAAATGT GTCGCGGGTT GAAACCTACG TAACACGTAA TAAGCCAACC
GATGAAGTGT TAAAGCCTAA AGGCGAGTTT TTAGAGCTAG TGCCTGTAAC CCATCCTGCA
GATATCGTTG AAAATGAAGC CGCTATATTG CAATTTGTTT TCGATGGTAA GCCTGTTGAA
GGCGTAAAAG TCGCCATTAT GAAAGACGGT AGCTTATATC GTAACAAGCC AGAAGAAATC
GAATTCACCT CAGATAAAGA AGGTAAAATT TCAATGACCT TACCTTCAGC GGGACGTTAT
CTCTTACATG CGGCGATTGA GCGCCCGAAT TCAGATAAAT CCCTTGCAGA TAAAACCGTA
AGCGAAATAT TTTTAACCTT CGAGGCGGGG CTTGAATAG
 
Protein sequence
MKLRLIALFT SLCISPLASS HDRWILPSHF NVSAESQEAV WITSDVSASN QVFMMDKPYT 
ASDVRVLQPN GKSTSPSSSY TGGRKSVFDV QLTQDGTYKF EKEVSPRYFS QYKVKGKEGV
VRSRLDKKST AAAMPKGAYD LESALNVSRV ETYVTRNKPT DEVLKPKGEF LELVPVTHPA
DIVENEAAIL QFVFDGKPVE GVKVAIMKDG SLYRNKPEEI EFTSDKEGKI SMTLPSAGRY
LLHAAIERPN SDKSLADKTV SEIFLTFEAG LE