Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2848 |
Symbol | |
ID | 5078682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3309077 |
End bp | 3309895 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500044 |
Product | hypothetical protein |
Protein accession | YP_001184366 |
Protein GI | 146293942 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000067409 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAC GTCTGATTGC ATTATTCACC TCGCTCTGCA TTAGCCCTTT GGCAAGCAGC CATGACAGAT GGATTCTACC TAGCCATTTT AATGTTTCCG CCGAAAGCCA AGAGGCTGTG TGGATCACTT CCGATGTGTC GGCCAGTAAT CAAGTTTTTA TGATGGATAA ACCTTATACT GCCAGCGATG TAAGGGTATT ACAGCCCAAC GGAAAATCAA CGTCTCCCAG TTCAAGTTAC ACGGGAGGGC GTAAATCGGT GTTCGATGTG CAGTTAACAC AAGATGGTAC CTATAAGTTT GAAAAAGAAG TATCTCCGCG TTATTTTTCT CAATATAAAG TCAAGGGAAA GGAGGGCGTT GTCCGTAGTC GCTTAGATAA AAAATCAACG GCAGCGGCTA TGCCTAAAGG GGCCTATGAT CTTGAAAGTG CCTTAAATGT GTCGCGGGTT GAAACCTACG TAACACGTAA TAAGCCAACC GATGAAGTGT TAAAGCCTAA AGGCGAGTTT TTAGAGCTAG TGCCTGTAAC CCATCCTGCA GATATCGTTG AAAATGAAGC CGCTATATTG CAATTTGTTT TCGATGGTAA GCCTGTTGAA GGCGTAAAAG TCGCCATTAT GAAAGACGGT AGCTTATATC GTAACAAGCC AGAAGAAATC GAATTCACCT CAGATAAAGA AGGTAAAATT TCAATGACCT TACCTTCAGC GGGACGTTAT CTCTTACATG CGGCGATTGA GCGCCCGAAT TCAGATAAAT CCCTTGCAGA TAAAACCGTA AGCGAAATAT TTTTAACCTT CGAGGCGGGG CTTGAATAG
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Protein sequence | MKLRLIALFT SLCISPLASS HDRWILPSHF NVSAESQEAV WITSDVSASN QVFMMDKPYT ASDVRVLQPN GKSTSPSSSY TGGRKSVFDV QLTQDGTYKF EKEVSPRYFS QYKVKGKEGV VRSRLDKKST AAAMPKGAYD LESALNVSRV ETYVTRNKPT DEVLKPKGEF LELVPVTHPA DIVENEAAIL QFVFDGKPVE GVKVAIMKDG SLYRNKPEEI EFTSDKEGKI SMTLPSAGRY LLHAAIERPN SDKSLADKTV SEIFLTFEAG LE
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