| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2753 |
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| Symbol | |
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| ID | 5080820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3189664 |
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| End bp | 3190746 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640499947 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001184271 |
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| Protein GI | 146293847 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.908437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC TGCATTACTT ATATGGCAAA CCACTCGGCA CTGCCGATTT ACGTACTCAA
AATAGCGATT TTATCGTGAA AGAGATTTTG CCCTTTAGCC CAACAGGAGA AGGGGAACAT
CATCTCTTAC ATATCCGTAA AGACGGGCTG AATACGGTTC AAGTGGCAGA AATGATTGCC
AAGTTTGCAA AGGTGCATCC AAAGGAAGTG ACCTATGCGG GCCAGAAAGA TAAAAATGCC
ATTACTGAAC AATGGTTTGG TGTACGCATT CCGGGTAAAG AAACTCCCGC TTGGGCAGAA
CTTAACAGTG AACGATTAAC GCTTCTCTCT AGTAGTCGCC ATAGCAAAAA ATTACGCATC
GGTGCACTAC TGGGTAATCG CTTTATTTTG ACTTTGCGTA ATGTCACTCA CGCTGAAGAT
ATCATTAGCC GGATTGAGAA AGTGAGTCAA ATCGGTGTCC CCAATTATTT TGGTGAGCAG
CGTTTTGGCC ATGATGGTAA AAATCTCGTC ATGGGACGCC AAATGTTGGC GGGTAAAAAA
GTGAAAGACA GAAACAAACG CAGCATGTAT TTATCTGCTG TGCGCTCAAA CTTGTTTAAT
ACCGTCGTGT CATACCGCTT AGCCAACCAT GGTACTAAAC CTTTAGCGGG TGATTGTGTG
ATGTTGGCGG GTAGCAAAAG TTTCTTCGTG ACACCCGAAT GGGATCTGGT GGTGTTGAAA
CGTCTGATTG AAAAAGATAT TCAACTATCA GCACCTTTGT GGGGTCGTGG CATGATGTTG
CCTCAAGGCG AAGCCGCGGC GATGGAAACC TTAGCGATGA GTGAGCTTAG CGATGACTGC
TATGGTTTGG AACATGCAGG ATTGGAGCAG GAACGTCGTC CATTACTGCT TGAGCCTCAA
GGGCTTAAAT ACGAAATAAC AGAAGATAGT TTAGTGTTAG AGTTTATTTT ACCCGCGGGT
AGCTTTGCGA CATCTCTACT TAGGGAACTG GTTAATTATC AGGATGTAAA AGAGCAGCAG
TGGCAAGCAA CAGTTACGTC AGAGGCTAAC GCTGTTAACG GTAGTGATGA CGCTGCATCA
TGA
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| Protein sequence | MSELHYLYGK PLGTADLRTQ NSDFIVKEIL PFSPTGEGEH HLLHIRKDGL NTVQVAEMIA
KFAKVHPKEV TYAGQKDKNA ITEQWFGVRI PGKETPAWAE LNSERLTLLS SSRHSKKLRI
GALLGNRFIL TLRNVTHAED IISRIEKVSQ IGVPNYFGEQ RFGHDGKNLV MGRQMLAGKK
VKDRNKRSMY LSAVRSNLFN TVVSYRLANH GTKPLAGDCV MLAGSKSFFV TPEWDLVVLK
RLIEKDIQLS APLWGRGMML PQGEAAAMET LAMSELSDDC YGLEHAGLEQ ERRPLLLEPQ
GLKYEITEDS LVLEFILPAG SFATSLLREL VNYQDVKEQQ WQATVTSEAN AVNGSDDAAS
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