| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2635 |
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| Symbol | |
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| ID | 5080688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3055284 |
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| End bp | 3056396 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499819 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001184155 |
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| Protein GI | 146293731 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0171634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGAG CTGCCCGACG CTTTTGGCGC GCTAGTGCTA TCAGCGTATT TGCCTTAGTG
GTATTAAGTG CCTGCCAAAG AGAAGTCACA GAGCATGCCA ACTCAGCCTC ATTACAAAAA
GTGGTCACAA TGCCGCTAGT GTTCACATCG AGCTATCAAC GTGAGCAAAT ATTCACAGGT
ACAATACGTG CGGGTAATAC TACGGGTATA GGATTTGAAC TATCAGGTAA ATTGAGCGAA
CTCTATGTCG ATAGCGGAAC GAAGGTCGTA CAAGGCCAAA TCCTTGCGAA ATTAGATACG
CACCTACTCG AGGCTGAGCG CCAAGAGATA CAAGCAAGCC TTGCACAAAC TCAAGCCGAT
GTTGATCTTG CAAGGAGTAC CCTAAAACGT AATCTTGAGC TTAAAAAGTC AGGTTATGTG
TCAGAACAAT TACTCGATGA AAATCGTAGT CAATTAGTTA GTTTAGAATC GGCTAAACAG
CGGCTGATGG CCTCTCAACA CGCGAATCGA CTAAAACTTG ATAAATCACA GTTATTAGCG
CCATTTGATG GTTCGATAAG CCAACGTCTT CATAGTCTAG GGGAAGTGGT ATCCACCGGA
AGCCCTGTAT TTACCTTAGT GGGCCATATG AATCCAGAGG CGTACATTGG TATTCCTGTG
GATATTGCGG ATCAATTTAG TCACGGAAAA CAGGTTAATG TTAGTGTAAA AGGTCAGCAT
TTTACCGCCA CAATTGCGGG TATTAGTGCA GAGGTCAATC CAATCAGCCG CACCTTACAG
TTACGCATTA GCCTACCAAA AGAATCAAGC GTTATTAATG GTGAAATCGT GTATTTACAT
CAACAACAAC ACGTGACTCA AGCGGGTTAT TGGGTGCCGA TTTCAGCACT AACCGATGGT
ATTCGCGGTC TCTGGAATAT CTACATAGTC ACATCAGACA AGGCCGAAGC AAAGATTGAA
CGCCGCGATG TGGAAATTAT CTACACGACC CAAGATATGG CTTATATCCA AGGGGCAATA
CAAGAAAATG AACACTATGT TAGCCAAGGG CTACAAAAAT TAGTTGTGGG TCAAGCCGTA
TCCCCTGTAA TCCTTTCTGG TACGAGGCAA TAA
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| Protein sequence | MNRAARRFWR ASAISVFALV VLSACQREVT EHANSASLQK VVTMPLVFTS SYQREQIFTG
TIRAGNTTGI GFELSGKLSE LYVDSGTKVV QGQILAKLDT HLLEAERQEI QASLAQTQAD
VDLARSTLKR NLELKKSGYV SEQLLDENRS QLVSLESAKQ RLMASQHANR LKLDKSQLLA
PFDGSISQRL HSLGEVVSTG SPVFTLVGHM NPEAYIGIPV DIADQFSHGK QVNVSVKGQH
FTATIAGISA EVNPISRTLQ LRISLPKESS VINGEIVYLH QQQHVTQAGY WVPISALTDG
IRGLWNIYIV TSDKAEAKIE RRDVEIIYTT QDMAYIQGAI QENEHYVSQG LQKLVVGQAV
SPVILSGTRQ
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