Gene Sputcn32_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2487 
Symbol 
ID5080904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp2886018 
End bp2886653 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content44% 
IMG OID640499655 
Producthypothetical protein 
Protein accessionYP_001184007 
Protein GI146293583 
COG category[S] Function unknown 
COG ID[COG3124] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.018845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTAACC AAGCACAAAA AATGAACTTT CTTACACACT TACATCTCGC TGACATCAGT 
AAAACTCATC TTGCAGCCAA CGTAGCAGGC AACTATATCC AAGCGCCAAT TGCGCAAGCC 
CCCGTTGAAT TTCGCCAAGC TTTATGGCTA AACCAAGAAA TTAATACGCT ATGCGCCAGC 
CATGAATTGA CGATTGAGTT AATGGAAGCC TTCCCTGCGC CCTTAAGAAG CATAGCAGCA 
GAACTGATGG CGGTGAGCTT TGATTACTAT TTAGCTTACT ACTGGGAAGA ATATCACCAC 
CAGCCATTGA ATGAATTTAG TCACAAAGCC TATGACGCTT TAGAGAATTT TGCAGCCCAA 
GGGATAGATC AATATCATCC AGAAGCTTTA ATTAAGCTAT TACCCACCAT ACGCAGCCAA 
GATTGGCTCG GCAGTTACGC CACCGAAAAT GGCTTACAAC AAGCCTTAGC ACAAGTGGCC 
AAACCGCATC CACAGGCAGC GCTGTTTAAA GATGCCCATA AAGTTGTGAA TAAAATGCAA 
ATTGAAATTG AAACCACATT CCGCACTTTT TATCCACAAT TAATGGCATA TAGCCGGATT 
TGGAGTCGTA AGACCCCTGC GGAATATTTA CCCTAG
 
Protein sequence
MVNQAQKMNF LTHLHLADIS KTHLAANVAG NYIQAPIAQA PVEFRQALWL NQEINTLCAS 
HELTIELMEA FPAPLRSIAA ELMAVSFDYY LAYYWEEYHH QPLNEFSHKA YDALENFAAQ 
GIDQYHPEAL IKLLPTIRSQ DWLGSYATEN GLQQALAQVA KPHPQAALFK DAHKVVNKMQ 
IEIETTFRTF YPQLMAYSRI WSRKTPAEYL P