| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2258 |
|---|
| Symbol | |
|---|
| ID | 5080230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2602452 |
|---|
| End bp | 2603714 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640499420 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001183778 |
|---|
| Protein GI | 146293354 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA GCTGTAAAGT GTCAGTTCAT CAACTCCAGA TAGGTAACTT TGTGCGTTTG
CCCGTCGCTT GGAAAGATCA TCCCTTTTTA TTCAGTAGCT TCCATATAAA ACAAGCTGCA
CAAATTGAGT TAATTAAAAA CCTTGGCATT GCACATGTTA TCGTCGATCT AGAGCGGAGC
GACGTTGAAC CTTTGAGTAT TGATGCCGTA AACCCGATCA AGTTGCCTCC TGCTCCAGAG
ATCCATGACC TTAAAAATGA CATGGAACTT TACAAGGCTG AGCAAATTGA AGTGCAAAAA
AAATTGCGCA GAGATATCCA TAAAACAGAA CAAAACTTTA CTCGCTCAGT GGCGATGATG
CGTAGCATGA TCTCCAAACT ACGTAATCGC CCACTCAACG CCGTTGATGA TGCAAAGGAT
TTAGTCCATA GCATAGTCGA ACAGCTACTC ACTTCTGACA ATTTGGTTCT GCACTTAATG
AGTGATGCTA AGCAAGATGA AAGCATCTAT TACCATTCAT TAAATGTCGC CATTCTATCA
ATGTTGATTG CGAAAGAGAT GGAATGGAGT CGCAGTGAAA TTGAAGCGAT TGGTTTAAGC
GCCCTTTTCC ACGATGTGGG TAAACTCAAA ATCCCCCCGC AGATCCTTAA AAAATCAACA
CCTTGGTCAG CGCCCGAACT TAACTTTATT AAACAACATC CATTACTCGG AGTTGAACTA
CTAAAACTAG CGGAAAACTT TCCACCTAGT GCACTCCCCG CCATTACTAA CCACCATGAG
TTTCTTGATG GCACTGGTTA CCCTAAGGGA CTTAAGGAGG CAGATTTGGA TCAAATGTCA
CAGCTTCTTG CAGTAGTAAA TGAGTACGAC TCACTTTGCT ATCCCAACCC GCAAGATAAA
CCAATGATGC CATACGCGGC TCTGGGGCAT TTGTATAAAC AATATAAAAC GAAGTTAAAT
CAAGAATATA TTGGAAAGAT AATCAAAATG CTCGGCATCT ATCCCCCTGG CAGCGTAGTG
GAATTATCCA GTGGTCAATA TGCCATGGTG ATGTCAGTTA ATCTGCAAAA GCTGCTCTGT
CCTAAGATTC TGGTCTACGA TGCCCAAGTG CCAAAGGATC AAGCGCCAAT CGTCGATCTT
GAACTGGAAG GTATTAGTAT TGTTCGCTGC CTTCCTCCGG CCGCTTTGCC CGAAAAAGTA
CATGAATATC TTAATCCACG TGAGCGTGTC AGTTACTATT TTGGTGGCGA TAGCCGTAAG
TAA
|
|---|
| Protein sequence | MKKSCKVSVH QLQIGNFVRL PVAWKDHPFL FSSFHIKQAA QIELIKNLGI AHVIVDLERS
DVEPLSIDAV NPIKLPPAPE IHDLKNDMEL YKAEQIEVQK KLRRDIHKTE QNFTRSVAMM
RSMISKLRNR PLNAVDDAKD LVHSIVEQLL TSDNLVLHLM SDAKQDESIY YHSLNVAILS
MLIAKEMEWS RSEIEAIGLS ALFHDVGKLK IPPQILKKST PWSAPELNFI KQHPLLGVEL
LKLAENFPPS ALPAITNHHE FLDGTGYPKG LKEADLDQMS QLLAVVNEYD SLCYPNPQDK
PMMPYAALGH LYKQYKTKLN QEYIGKIIKM LGIYPPGSVV ELSSGQYAMV MSVNLQKLLC
PKILVYDAQV PKDQAPIVDL ELEGISIVRC LPPAALPEKV HEYLNPRERV SYYFGGDSRK
|
|---|
| |