Gene Sputcn32_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2180 
Symbol 
ID5080056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp2508666 
End bp2509787 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content52% 
IMG OID640499342 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_001183700 
Protein GI146293276 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAG TAAGCAGCAT GGAAAAGACA GCAGAACCTA CAGTATTAGC GCTAAATTTA 
GCCGAGCGTT TAGCGCGCCC TGAGTTACTG GATTTAACGC CCTACCAGAG TGCCCGCAGA 
CTAGGCGGTC GTGGTGATAT TTGGATCAAT GCCAACGAAT CCCCCTTTAA TAATGTCGAT 
ACGGCAGCGC TCGATTTATC AAAATTGAAT CGTTACCCAG AATGTCAACC GCCGCAGCTT 
ATCAGTGCCT ACAGCAACTA CAGCGGCGTA AGCGCCAGTA AGATAGTTGC CAGCCGCGGC 
GCCGATGAAG CGATTGAACT ATTAATTCGT GCCTTTTGTA TACCTGCCGT CGACAGCATT 
GCCTGCTTTG GCCCAACTTA CGGCATGTAT GCCATCAGCG CGAACACCTT TAATGTGGGC 
GTTAAAGCGT TAAATCTCAG CGCGGAATAT GGCTTGCCGT CAAGCTATGC CGAGGACGTT 
CGCGGCGCAA AACTGGTGTT TATCTGCAAT CCCAATAATC CGACCGGCAC TGTGATCGAC 
AAAGCCATTA TCGAGCAAGC GATCAAAGCC CTGCCTGACG CGCTTGTGGT CATTGATGAA 
GCTTATATTG AGTTTTGCCC CGAATACAGC GTGGCGGATT TGCTGGAAAG CTATCCGAAT 
CTGGTGGTAC TGCGCACCCT GTCAAAAGCC TTTGCACTCG CCGGCGCACG CTGTGGTTTT 
ATGCTGGCAA ACAAGGCCGT AGTCGAAATC ATTATGCGCG TGATTGCGCC CTATCCTGTG 
CCGCTGCCCG TGAGTGAAGT CGCCACACAG GCGCTATCGA GCGCAGGCGT TGCCCGGATG 
AAAATTCAGG TAGAAGAACT CAATCAACAG GGTAAAAGAC TTGCCGCGGC ACTCAATCTT 
TACTGTGAAC AATGGGGCGG CAGAGTGCTA ACTCCCCATG GCAACTACGT ATTGGCTGAA 
TTTGATGATG TCGCCAAGGT CGCGGCGTTA CTGCAAGGCA GTGGTGTTGT CGCCCGCGCC 
TACAAGGACC CAAGGCTTGC CAAAGCGATA CGCTTTAGCT TTAGTTCAAA GGCGGATACC 
GATCGCTTAG TCGCCCTTTT TGAGTCACAA CGAGTTGAAT AA
 
Protein sequence
MSQVSSMEKT AEPTVLALNL AERLARPELL DLTPYQSARR LGGRGDIWIN ANESPFNNVD 
TAALDLSKLN RYPECQPPQL ISAYSNYSGV SASKIVASRG ADEAIELLIR AFCIPAVDSI 
ACFGPTYGMY AISANTFNVG VKALNLSAEY GLPSSYAEDV RGAKLVFICN PNNPTGTVID 
KAIIEQAIKA LPDALVVIDE AYIEFCPEYS VADLLESYPN LVVLRTLSKA FALAGARCGF 
MLANKAVVEI IMRVIAPYPV PLPVSEVATQ ALSSAGVARM KIQVEELNQQ GKRLAAALNL 
YCEQWGGRVL TPHGNYVLAE FDDVAKVAAL LQGSGVVARA YKDPRLAKAI RFSFSSKADT 
DRLVALFESQ RVE