Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2076 |
Symbol | |
ID | 5079502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2375038 |
End bp | 2375520 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499238 |
Product | YCII domain-containing protein |
Protein accession | YP_001183596 |
Protein GI | 146293172 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000637229 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCTTA ACACTGTCTT TAACGCTAAG GTCACCATCA GCCTTATCAC TTGTCTATTA TGTGGATTAG TGGTGAGTTT TTCAGCGCAT AGTACTCCAC AGTTTGACGA GCAGCGTGCT AAAAATGCCG GTGCCGATGA ATATGGTATG AAGCACTATG TCATGGCCTT TTTAAAGCGG GGCCCTAATA GGGATAGAAC ACAGGCACAG GCCGAGCAAT TACAACGGGC GCATTTGAAC AATATCACTC GCCTTGCCAA TGAGGGTAAA TTAGTGCTGG CAGGGCCCTT TTTACACGAT GGCGAATTAC GCGGCATTTA TGTTTTTGAC GTTACTACGG TTGAAGAGGC AAAAGCCTTA ACGGAAACCG ATCCTGCAAT TCAAGCGGGT AGCCTAGTAT TGGAGTTATT ACCTTGGTAT GGCAGCGCCG CACTGACAGA GGTGAATGAA CTGCATAGGG TGATGGCGAA AAAAGATATT TAA
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Protein sequence | MQLNTVFNAK VTISLITCLL CGLVVSFSAH STPQFDEQRA KNAGADEYGM KHYVMAFLKR GPNRDRTQAQ AEQLQRAHLN NITRLANEGK LVLAGPFLHD GELRGIYVFD VTTVEEAKAL TETDPAIQAG SLVLELLPWY GSAALTEVNE LHRVMAKKDI
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