| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2075 |
|---|
| Symbol | |
|---|
| ID | 5079501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2374551 |
|---|
| End bp | 2375006 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640499237 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_001183595 |
|---|
| Protein GI | 146293171 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000572229 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAAC CAAGGCACTT CAGCCCCAAT TTAGCCAAAA GCGCCTTTGC GAAGGCGCCC
ATAGTGCGCC TTCAGGGCCA ACCTGTGCTG CTCTTTACCG AGCAACAGGG GTCTTTGTTG
CAAGCACTCG AAGCGAAGAA CATCAAGATG TTCTCTGAAT GCCGCAGCGG TTTCTGTGGT
GCCTGCAAGA CGAGGATTAT CAGCGGTAAA GTCAGCTATT TGAGCGAGCC CTTAGCCGAG
CTGAATAACG ACGAATGCCT ACCCTGCTGC TGTATACCTT CGGAGGATTT AGAACTCGAT
TTATCCCCCG AAGGGGCGAC TGTTGTCACC TACGCAGCCA ATGTGGCCAG AAAGCCACAG
CAAATGGGCC ACACCCATTC ACCAACGCAG AGCACTATAT CCCATAGTGC AAAGCCGCTG
ATCTCACCAA AAATCGCCGA AGTGTGCGAA GAATAA
|
|---|
| Protein sequence | MAKPRHFSPN LAKSAFAKAP IVRLQGQPVL LFTEQQGSLL QALEAKNIKM FSECRSGFCG
ACKTRIISGK VSYLSEPLAE LNNDECLPCC CIPSEDLELD LSPEGATVVT YAANVARKPQ
QMGHTHSPTQ STISHSAKPL ISPKIAEVCE E
|
|---|
| |