Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2053 |
Symbol | |
ID | 5079479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2345517 |
End bp | 2346464 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640499215 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_001183573 |
Protein GI | 146293149 |
COG category | [R] General function prediction only |
COG ID | [COG3940] Predicted beta-xylosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAAAC TCACCCCTTT AATCGAACAA CGTGCCGACC CGTTTATTTA TAAACATACG GATGGTTTTT ATTATTTCAC CGCCTCAGTA CCTCAGTACG ACCGTATTGA ATTACGCCGA GCAACGACTA TTGCAGGTCT TGCCGATGCA GTCCCAGTGG ATGTCTGGCA TAAACCCGAT ACAGGCCCCT ATTCCGATCT AGTGTGGGCA CCAGAACTCC ACTTTAACCA AGGGGCTTGG TACTTGTATG TCGCCATAGC CCCAAGCCGT GAAATTAAAG ATGCATTGTT TCAACATCGT ATGTATGTGC TGCGCAGCAA TGATGCCAAC CCGCTAACGG GCGAATGGCA GTTCCTTGGC CAACTTGATA CTGGCATAGA CACCTTTTGT CTCGATGCGA CAACATTCGA ACACAATGGG CAGCTGTATT ATGTTTGGGC GCAAAAAGCC CCTGATATTC AAGGGAACAG TAATCTTTAT ATCGCGAAGA TGGATACACC TGACAAGATA AGCTCAGCCC CCGTGATGCT GACAAAGCCT GAGTACCCAT GGGAAATTAA AGGGTTTTGG GTGAATGAAG GCCCATCAGT GCTAAAACGC AATGGCAAAA TCTTTATCAC TTATTCAGCC AGCGCGACCG ATGAAAATTA TTGCATGGGT TTACTGCATA TTGATGAAAA TGCTGATTTA CTCGATGCAA GTCAATGGCA TAAATCATCA AACCCTGTGA TGACAAGTTG CTATGAGTAC GGTGTTTATG GGGCTGGACA CAATAGTTTC ACCCTTGCAG AAGATGGTGA AACGGTTTTA TTGGTGTATC ACGCACGTAC TTATACTGAA ATTGAAGGCG ATCCATTGTG GGATCCAAAC CGTCACACCT ATGTCAAGGC GCTTCGTTGG GATGATTCAG GTATGCCGGT ATTTGGTAAG CCATCTATCC AAGAGTAA
|
Protein sequence | MLKLTPLIEQ RADPFIYKHT DGFYYFTASV PQYDRIELRR ATTIAGLADA VPVDVWHKPD TGPYSDLVWA PELHFNQGAW YLYVAIAPSR EIKDALFQHR MYVLRSNDAN PLTGEWQFLG QLDTGIDTFC LDATTFEHNG QLYYVWAQKA PDIQGNSNLY IAKMDTPDKI SSAPVMLTKP EYPWEIKGFW VNEGPSVLKR NGKIFITYSA SATDENYCMG LLHIDENADL LDASQWHKSS NPVMTSCYEY GVYGAGHNSF TLAEDGETVL LVYHARTYTE IEGDPLWDPN RHTYVKALRW DDSGMPVFGK PSIQE
|
| |