Gene Sputcn32_2050 details

Gene Information

• Locus tag: Sputcn32_2050
• ID: 5079476
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 2340898
• End bp: 2342784
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640499212
• Product: Alpha-N-arabinofuranosidase
• Protein accession: YP_001183570
• Protein GI: 146293146
• COG category: [R] General function prediction only
• COG ID: [COG3940] Predicted beta-xylosidase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.647188
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCATT CTCTGACAAC ATTGATGGCC GCGATGGCGC TCACATTTGG CTTTAGCACT 
GGAGTGGTTG AAGCGTCACC TGTGCCTGCT GATAATCATA TTACCAGTGA AACCTTTGCC 
AACCCATTGT TTCGTAATGG TGCAGATCCT TGGCTTGCAT ACCATAATGG AAACTATTAT 
TTGACGACGA CCACTTGGAC CTCTGAATTG GTGATGCGTA AATCGCCTAC GATAGCAGGG 
CTTGCCGATG CCCCTGCGCA CAATATTTGG TCAGACGATG ATAAGTCCCG TTGCTGTAAT 
TTTTGGGCGT TTGAATTCCA CCCCATGCAA ACCGCAGAAG GTTTGCGTTG GTATGTGATT 
TATACCTCGG GTGTAGCAGA AAATTTTGAT GGTCAGCGCA ATCATATCCT TGAGAGTGAA 
GGCAGCGACC CTATGGGGCC CTATAAATTT AAGGGCACTC CCATGCCAGA ACACTGGAAT 
ATCGATGGCA GTTACTTAGA GCACAAGGGG CAGTTGTACT TTTTGTGGTC AGAATGGCAT 
GGTAAAGATC AAGTGAACCT CATCGCTAAA ATGACCAATC CTTGGACGGT AACGGGCGAT 
CATAAAGTGA TCACTCAGCC CATTTATGAC TGGGAAAAGT CAGGCTTAAA TGTCAATGAA 
GGGCCTGAGA TTATTCAGCG TGATGGACGC ACTTTCCTCG TTCATTCGGC CAGTTTTTGT 
AATACAGAGG ATTATTCTCT CGGTGTTGTT GAGCTAACAG GGGATGATCC TATGGATCCT 
GCGGCTTGGA CAAAATTCGA CAAACCCTTC TTCAGTAAAG CCAATGGCGT ATATGGCCCA 
GGTCATCATG GATTTTTTAC CTCCCCCGAT GGCAGCGAAG ATTGGTTAGT GTATCACGGT 
AACTCATCAC CCACAGATGG TTGCAGTGGT ACCCGCGCCG CCAGAGCACA ACCTTTTAAG 
TGGGATGATA ACGGCTTACC GCAGTTTGGT GCGCCATTAG CCGACAAGCA ACAGTTACCT 
GTTCCAAGCG GCGAGTTTGG GCCATTAAAA GCCCAAGTTG AAGGGGTGAA ATACCGCATC 
GTCAATCGTG ATATTAATCA ATGTTTAGTG ACCAATGCGA AAGGAGAAGT CAGTGTTGGT 
CAGTGTGATG ATAAAGCCAG TGCTTGGATT ATCGACCCTG CTAACGATGG TTTATATCGG 
TTTGCTAATG TGGCCGAAGG GACCTTTTTA ACGCAAGCTG ACTGCCAAGA TGAAAAGGCC 
TCGGACGTGA ATGCCGCGCC TTGGGTTGCG TCCCGTTGTC AGCGTTGGTC GGTTGATGCG 
AGTCGTGATG GCTGGTTCCG TTTTGCCAAT GAGCGCTCGA TTAAAAATCT ACAAGCGGCC 
AATTGCAGCA GCAAAAAGAA CTCGGCAGTG GTTGCCGGTG AAAATCGTGT CAGCGAGTGT 
ACTGACTGGC GTATCGAACC CATGTCCCAT TTTGCAATTG TAAATGCCCA CAGTGGCCGT 
GTAGTCTCAG CGCAGCAATG TGACACAAAG GCGAATGCCA ATGTTGTGCA ATATGAATAC 
ACTGCTAACG CTTGCCAGCA ATGGCACGCG ACATCCACCA GTGAAGGCTA TTATCGTCTG 
CAATCAAATC AACTGACGGC GAATAAACAA GCCCAGTGCT TAGTCAGTGT TGAGGGGAAT 
TTGCAACTTG GCGCCTGTGA TAAAGATGAC AGCGAATGGC GCACTGAGTT TATGCCAAAT 
GGTTCCCTTC GAGTGGTATC GCGCAAAGGG GGATCGTCGA TGAAAGTCGC GGGCGAGTCC 
TATGCCAATG GCGACAATAT TGTTGAGGAG GTGTGGAAGA ATACCATTTC GCAGCAGTTC 
TATTTCAGGG AGGTGAAAAC CAAATAG 

 

Protein sequence

MTHSLTTLMA AMALTFGFST GVVEASPVPA DNHITSETFA NPLFRNGADP WLAYHNGNYY 
LTTTTWTSEL VMRKSPTIAG LADAPAHNIW SDDDKSRCCN FWAFEFHPMQ TAEGLRWYVI 
YTSGVAENFD GQRNHILESE GSDPMGPYKF KGTPMPEHWN IDGSYLEHKG QLYFLWSEWH 
GKDQVNLIAK MTNPWTVTGD HKVITQPIYD WEKSGLNVNE GPEIIQRDGR TFLVHSASFC 
NTEDYSLGVV ELTGDDPMDP AAWTKFDKPF FSKANGVYGP GHHGFFTSPD GSEDWLVYHG 
NSSPTDGCSG TRAARAQPFK WDDNGLPQFG APLADKQQLP VPSGEFGPLK AQVEGVKYRI 
VNRDINQCLV TNAKGEVSVG QCDDKASAWI IDPANDGLYR FANVAEGTFL TQADCQDEKA 
SDVNAAPWVA SRCQRWSVDA SRDGWFRFAN ERSIKNLQAA NCSSKKNSAV VAGENRVSEC 
TDWRIEPMSH FAIVNAHSGR VVSAQQCDTK ANANVVQYEY TANACQQWHA TSTSEGYYRL 
QSNQLTANKQ AQCLVSVEGN LQLGACDKDD SEWRTEFMPN GSLRVVSRKG GSSMKVAGES 
YANGDNIVEE VWKNTISQQF YFREVKTK