| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2048 |
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| Symbol | |
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| ID | 5079474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2336822 |
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| End bp | 2339656 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640499210 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001183568 |
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| Protein GI | 146293144 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00100179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAC AGACTTATTT GGCAAGTGCG ATCATTCTCG CACTCACAAG CCAAGCTACG
TTTGCGGCAA ATAATGATAT TGCACCACAG GATCAGGTAG AAGTTGAGTC TACGACTCAA
GAAGAAACAC AAGCCGATAA CCCACGACCG AATGAAGAAG CCATGGAAAT CATTCAGATC
CAAGGTATTC GTGGCAGTTT AAATAAAGCT GTAGAACTTA AACGTCAAAA TGTTCAGGTA
GTTGAAGCGA TTATCGCTGA AGATATTGGT AAATTTCCCG ACAATAACGT GGTTGAAGCA
CTGCAACGAG TGACTGGGGT ACAAGTCACT GATCGTGCCT CAGGTGAAGT TAACACCGTG
AGTATTCGGG GTTTAACCGA TGTCACAACA ACCGTTAATG GTCGTCAAAT TTTCACCGCC
GCAGGCCGTG AAGTCGCTAT TGCCGATATT CCATCGGCAT TACTGGGCAG TGTAGAAGTA
TTTAAAACGC GTTCATCCTC GCAAGTCGGC AGTGGTATTG CGGGTCAAAT TGATATTCGC
ACCCATCGAC CTTTTGATTT TAGTGATAGC AAAGTCAGTG TCGCGGCTAA AGGCATATAT
TCAGATCAAC CCGATAAAGT CGATCCAGCA TTGAGTGCTC TGGTCAGTGA CCGCTGGGAT
ACCGCAATCG GTGATGTCGG AGCGCTGTTA AACGTATCTT ATATTCGAAC TAATTATAAT
GACCAAGTTG TCTCCCCTGG TGCCTCATTA CCCTACTCTG CAGAAACGGG TCTGTTAGTT
AATGATGCCT ATTGGACACG AGGTCTCGCT CACGGCCTAG ATACCACAAA AGGCGCACTC
ATTAACGGTG AAGAATACCT GTTAATGCGA GATGCTATTT TCCAAAATAT GAATGTTGGT
GAGCGCGAAC GCCCTGCGCT TAATCTGTCT TTACAGTGGG CGCCGACTGA TAATTCAGAA
TACTTATTTG AAGCATTTTA TAATGGCTAT CGTAACAATA GTGCCAACGC CATGCTTTTT
AGTAACGTAG ATTCGGCTGA TAATTGGAGT CAAGTTATTG ATAATGGAAT TGAAATATAT
GATGGCACCA ATGTGGTTAA ATCGAGAACG GCCTATAATG TGGGAGGCTT TAGTAGTTCA
GATCACAGCC ACAACAGCAC CGATAGCTAT GTATTTGCCT TAGGTGGTAA ATGGGATCTG
GATGATGTGA CCTTAAAATC TGAGGTTGTC TATCAAACCA GTACCTATGA ATCATCGTTC
ATCGCGATGC GAGGGATCAG TGCTAACAGT AATAAAAAAT TCTACGGAGT GGATGTTGAT
TACAATAATA AAAGTGGCGG TGTACCAAGC TGGGCTTATT TAGATGATCC AAGTACTGCG
ATTAATGAAT CTGATTTATC CCAATTAGCG TTGTGGCAAA CCTCTAATAT GTATGACAGC
GGAACCAAGG ATGAAGGCGA CTCGGTAGCT TGGACCTTAA ATGGTGATTA CTATCTCGAT
TACAGCATCT TCACCAAAAT GAAATTTGGT ACTCGTGTCG AAAAACGGGG AGCCAAACAC
GGCCTCTATG ATGCTGGTGC ATTAGATAAA AATATTAAGT TTACTGATCT TGACCCCAAC
ATGTTTACTG TTGCCTCTGG CTTCTTTGAT GGTCGCGGTA ATGTTCCTAC AAACTGGGCG
CTGGTAGATG GCAACTATCT ATATGCTAAC CGCGCAGCCA TTGAGGCTTT ATATGGTGCT
GATGCAGATG CATTGGCAAT GTATACAAAC TACGATATCG ATGAAACGTC CTATGCGGCT
TATATCCAAA GTGATTTTGA AACCGAGCTA TGGGGTAAGC AAGTCGATGG TCAAATAGGT
ATTCGCTATG AAAAAGCCGA TGCCGATATG GATTTTTGGG AGAGGAAACA AGACACTGTC
ACTGAAAAGT ACTATCTTGA GCATTCATCC GATACTAATG GTAGTTCAGA AATTCTACCA
AACCTGATGG TTCGTTTCTG GCTAACCGAT GAATTAGTTG CCCGTTTTTC CTATTCAGAA
ACCATTCGTA GACCTGCTTT TGGTGATTTG AGTACCGCTA TTTCATATGT AGAAGATTTG
ACAAATCTTG GCTTTGGCCA AGCATCCAGT GGTAACTCAA AACTTAAGCC TACGACGTCA
AAAAACTATG ATTTTTCATT GGAATATTAC TTTGGAGAAG GTTCATCCAT CTACGGTACT
TATTTCCGCC GTGATATCGA AGGGTTTGTG TATAACTCAA CAACCACAAC GACACGCGAA
GTTGATGGTG AAATCAAAAC TTACCTATTA AGCCGACCAG ATAACTCTTC TAACGGCGAG
CTAACTGGCT TTGAACTTGG CACAGTATAT TTCCCTGAAA ATCTGCCTAG TTATCTTGAT
GGCATTGGTA CTCAGATGAG TGCAACCTTT TTGGATTCTA GCCAAGACAT TCCGGAATAC
GATAGCAAGA CTGGTGAAAA AACAGGATCG ACTACCAGAG AATTGTTCGG CGTTTCCGAC
ACATCTTGGA GTGCAATATT GATTTATGAC AAAGAAGTGT ACAGTGCCCG CTTGTCTTAC
ACTTGGCGTG ATAAATTCTT AAATGCATAC GATGCGGGAA GTTTTGCTAT GCCACGGGGT
ATCTATCGTA AGCCAGAGCA AAGTTTAGAC TTCCAGTTTA GCTACAACTT AATGGATGAT
TTGGTGTTGA CCTTCGATGC AACCAATATT CTTGATGATG TGTACCAAGA ATACTATGAG
GACTCAGTGC TCTTTAACCG TACAAATAGT ATCTATACCC GCACATTTGC ATTAGGCGTT
CGCTACTCGT TCTAA
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| Protein sequence | MFKQTYLASA IILALTSQAT FAANNDIAPQ DQVEVESTTQ EETQADNPRP NEEAMEIIQI
QGIRGSLNKA VELKRQNVQV VEAIIAEDIG KFPDNNVVEA LQRVTGVQVT DRASGEVNTV
SIRGLTDVTT TVNGRQIFTA AGREVAIADI PSALLGSVEV FKTRSSSQVG SGIAGQIDIR
THRPFDFSDS KVSVAAKGIY SDQPDKVDPA LSALVSDRWD TAIGDVGALL NVSYIRTNYN
DQVVSPGASL PYSAETGLLV NDAYWTRGLA HGLDTTKGAL INGEEYLLMR DAIFQNMNVG
ERERPALNLS LQWAPTDNSE YLFEAFYNGY RNNSANAMLF SNVDSADNWS QVIDNGIEIY
DGTNVVKSRT AYNVGGFSSS DHSHNSTDSY VFALGGKWDL DDVTLKSEVV YQTSTYESSF
IAMRGISANS NKKFYGVDVD YNNKSGGVPS WAYLDDPSTA INESDLSQLA LWQTSNMYDS
GTKDEGDSVA WTLNGDYYLD YSIFTKMKFG TRVEKRGAKH GLYDAGALDK NIKFTDLDPN
MFTVASGFFD GRGNVPTNWA LVDGNYLYAN RAAIEALYGA DADALAMYTN YDIDETSYAA
YIQSDFETEL WGKQVDGQIG IRYEKADADM DFWERKQDTV TEKYYLEHSS DTNGSSEILP
NLMVRFWLTD ELVARFSYSE TIRRPAFGDL STAISYVEDL TNLGFGQASS GNSKLKPTTS
KNYDFSLEYY FGEGSSIYGT YFRRDIEGFV YNSTTTTTRE VDGEIKTYLL SRPDNSSNGE
LTGFELGTVY FPENLPSYLD GIGTQMSATF LDSSQDIPEY DSKTGEKTGS TTRELFGVSD
TSWSAILIYD KEVYSARLSY TWRDKFLNAY DAGSFAMPRG IYRKPEQSLD FQFSYNLMDD
LVLTFDATNI LDDVYQEYYE DSVLFNRTNS IYTRTFALGV RYSF
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