| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2047 |
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| Symbol | |
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| ID | 5079473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2332911 |
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| End bp | 2336249 |
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| Gene Length | 3339 bp |
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| Protein Length | 1112 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640499209 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001183567 |
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| Protein GI | 146293143 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000114958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCTTC AACGCTCATT CGTGTCTGTA GGATTGATTT TAGCGCTTGC TTCCTGTGGT
GGGGACGACA GTAGCAACAG TGCTAACGAC ACAAATACCT TTACACTTCC GCCTCCAATA
ACCTTTGCCA ATCCAACCCT TTCTGGTGAT GTGAATTACA CTGATGTGGT TGTCCATGAT
CCTTCGATCA TCAAAGATAC CGATGGCACC TACTATGTGT TTGGTTCTCA CCTTGCTGTT
GCAAGTTCAA AGGATCTTAT CAGTTGGACT CAAATTGCGC TTGATGGGGT AGAGACCAGC
AGTTTGTTTA ATACGTATGC AACTGAAATC GCAGAAGGTA CAGCATGGAC GGGAGGCTTT
ATTGGGTCGT GGGCGCCTGA TATTAAAAAG TTAGCCAATG GTAAATACCA TTTTTACTAT
AACTTTTGTG CAGGGCCTGT TGAATCGGAT TGTGTTTCCC GCTCCTACCT CGGGATGGCG
ACGTCTGACA AGATTATGGG GCCTTATGTT AACCAAGGTT TATTCCTAAA ATCTGGGCAT
GAGGGTGCCG AGAACCCAGG AGTTAATGGT AAAGACTACA GTGGATATAC CGATCCTAAT
GCTATCGATC CTGCCATTTT CTACGATAAA GATGGCGGAC TTTGGATGAC CTATGGTTCG
TATTCGGGTG GTATTTGGGT ATTGCAGCTC GATCCGACAA CAGGTAAACC GCTTGATGGC
CAAGGGTATG GCACTAAGAT CATGGGCGGT GATTATAGTC CGATTGAAGG CTCTTACGTT
ATCTATAGCC CTAAATCTGA ATATTATTAT ATGTTTACCT CATTTGGTGG CTATGAGCAA
AATGATGGTT ATAACATTCG TATTGCGCGC GCTAAAACAC CAAATGGCCC TTATGTCGAT
GCTTCTGGCA AGGATATGAT TGATGTGACG GGCAACGCAG AGATGATAGC GCCCTATGGT
GCGAAATTAA TGGGCAGTTT TCTATTTGAT GCCCATCCAG GAGATGTAGG AACTGATATC
GGCTATATGT CACCAGGGCA TAATTCTGCT TTTTATGATG CAAATACGGG AAAATATTTC
TTAGTATTCC ACACTCGCTT CCCTGAAACA GGTGAAGGAC ATAGTGTTCG AGTGCATGAA
ATGTTTATGA ATAGTGATGG CTGGTTAGTT GCATCTCCAC AACGTTATGC CGCTATAAAT
GGGGAAAACA TTGTCGATGA ATTGGATATT CAAGGCGCTT ATAAATTTAT TAACCATGCA
AAAGACATTA ATACTAAACC ACATAAATCT GTTCATATTC AGTTAAAAAG AACTTGGACC
AATAAAGGTG CGATTACTGG CGATGTCACA GGAACTTATG TACAAACAGA TGATAGCCAC
ATCACGTTAA CCCTTGATGA CTTAGGCACA TTTGAAGGGG TATTAGCATG GCAATGGGAT
CCAAACCAAG CGAAGTTAAT GCCCACATTT AGTGCGATGT CCAGTGACGG TGTCAGTATT
TGGGGCACAA AATTAGCAGA TAAAACCACA GATCAAATAT TAACGGATAC CGTTAATGGG
ATTAGTGTTG TTTCGGAAGC GACAACAGAT TCAATTCTTT TACCCACTGA AGGTACGCAT
GGTGCAACCA TTAATTGGGT TTCAAGTGAT GAGGGCGTGA TCCGTACCGA TGGAACCATT
ATTAGGCCCA ATGCAGGGGA AGGCGATAAG GTCATCACTT TAACAGCGAC TGTGATGGTA
AACGGCAAAA AAGTGACTAA AACTTTCCAA GTGACTGTCT ACGCGAGAAA AGCCTATAAC
CGTATTGCAC ATTATCGCTT TGAAAATAAT CTTAATGATA CTTTGGGGTT ATTTGCTGCA
GGTCAACCTA CGGGTGATCG GATATTTAAA TCAGCAGAAT CAGTTGGTTA TAGCATGGGC
CTCGAAGGGC AAGCGCTTTC CCTCGATGGT GCACACGGTG TACTGCTCCC GAGCGGTATT
ATCTCAAGCT ATGAGTACAC TGTATCGTTT TGGGCAAATC CTAGCGTAAT AGCGCAATTT
ACTACCGCAT TTTTTGGTGC TGTAAATGAA CAAGCAGCTG AAGATGGCAG TAAGTTTTCC
AACACTTGGA TCAGTATGTT ACCCCAAGGT TGGGACGGCA ATACCATGTT CTGGAGTAAT
GGTACCGCTT GGTTTGATGG GGTAACGGGT GAACGTATTG CTGAAAATAC GTGGTCTCAC
TTAGCTTTTT CGGTGAAAAA TGGTTTAGTG AATGTCTATA TCAATGGCAT TGAGAAATTT
AGCCAAGGTA ATCTCGCTGA TTTCTTTACA GGTAATGAAG GGGTATTTGC CCTAGGGGTT
AACTATTGGG ATATTCCCTA TAACGGTTTA CTTGATGAAC TTAAGGTATA TGAAGCGGCA
TTAACGGCTG AAGAAGTCAA AGCACTAGAC ATCGATAAGT TGCCAGATAG CGAACTACTG
GCTTCTGCGG TTGATATTCT TGACCTAGGT GATTTAACCG CAGTGCGTAA AGACTTAATT
TTACCTGTGA CTGGCCCTTA TGCTGCAGCG ATAACTTGGG CATCATCGGA TCCAACCACG
ATTGATCATA AAGGTGGAGT TAATCAGCCG AGTCGAGATG AAACCGATAA AGTGGTCACT
CTCACGGCAA CACTTAAACT TGGTCAAGCG ACACAAACTA AAGTCTTTAC TGCTACCGTA
AAATCAAAAG CACCACCAAC ACCTATCGCA GTTTATAGTT TTGAAGATAA TCTTATCGAC
AACACTGCAA ACTTTGGTGC AGGTAATGTA GTGGGTAAGT TGATTGGTAC GACCGGAGGG
ACGATTAGTT ATGCCGCAGG TGCTGTGGGT AAGGCCGCGG TGTTTGATGG GGCTTCAGGT
ATTGAATTAC CGAATAACCT GATTAAAGAC AATACTTATT CCGTATCACT CTGGCTCAAT
CCCAAAGTAC TCAATAAATA CACCACTGCA CTGTTTGCTT ATGCGAGTAC CTCGAGTTGG
ACCAGTATAT TACCTGGTGG TCAAAACGAT TATGAGCGTT TGGTACTCTG GTCGGGTGAA
GCTTGGTATG ATGGCAGAAC AGGTTATGTG ATGCCTAAAG ATCAGTGGTC GCATATGGTT
TACACTGTCA ATGCGGGTGA TGTTAAGGTA TACGTTAATG GTAACCTGAT GTTTACTGGT
GCTAATTTCC CTAATGTGTT CTCGGCACCA ACCACGAAAT TTGCTGTTGG CGTTAACTTC
TGGGATGTTC CATTTAGCGG ATCTATCGAT GAGATTAAAT TCTACGATGA AGTTGTCACC
GAGCAAGACG TAAAAGAATT ATTTGATGAA TCTAAGTAA
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| Protein sequence | MVLQRSFVSV GLILALASCG GDDSSNSAND TNTFTLPPPI TFANPTLSGD VNYTDVVVHD
PSIIKDTDGT YYVFGSHLAV ASSKDLISWT QIALDGVETS SLFNTYATEI AEGTAWTGGF
IGSWAPDIKK LANGKYHFYY NFCAGPVESD CVSRSYLGMA TSDKIMGPYV NQGLFLKSGH
EGAENPGVNG KDYSGYTDPN AIDPAIFYDK DGGLWMTYGS YSGGIWVLQL DPTTGKPLDG
QGYGTKIMGG DYSPIEGSYV IYSPKSEYYY MFTSFGGYEQ NDGYNIRIAR AKTPNGPYVD
ASGKDMIDVT GNAEMIAPYG AKLMGSFLFD AHPGDVGTDI GYMSPGHNSA FYDANTGKYF
LVFHTRFPET GEGHSVRVHE MFMNSDGWLV ASPQRYAAIN GENIVDELDI QGAYKFINHA
KDINTKPHKS VHIQLKRTWT NKGAITGDVT GTYVQTDDSH ITLTLDDLGT FEGVLAWQWD
PNQAKLMPTF SAMSSDGVSI WGTKLADKTT DQILTDTVNG ISVVSEATTD SILLPTEGTH
GATINWVSSD EGVIRTDGTI IRPNAGEGDK VITLTATVMV NGKKVTKTFQ VTVYARKAYN
RIAHYRFENN LNDTLGLFAA GQPTGDRIFK SAESVGYSMG LEGQALSLDG AHGVLLPSGI
ISSYEYTVSF WANPSVIAQF TTAFFGAVNE QAAEDGSKFS NTWISMLPQG WDGNTMFWSN
GTAWFDGVTG ERIAENTWSH LAFSVKNGLV NVYINGIEKF SQGNLADFFT GNEGVFALGV
NYWDIPYNGL LDELKVYEAA LTAEEVKALD IDKLPDSELL ASAVDILDLG DLTAVRKDLI
LPVTGPYAAA ITWASSDPTT IDHKGGVNQP SRDETDKVVT LTATLKLGQA TQTKVFTATV
KSKAPPTPIA VYSFEDNLID NTANFGAGNV VGKLIGTTGG TISYAAGAVG KAAVFDGASG
IELPNNLIKD NTYSVSLWLN PKVLNKYTTA LFAYASTSSW TSILPGGQND YERLVLWSGE
AWYDGRTGYV MPKDQWSHMV YTVNAGDVKV YVNGNLMFTG ANFPNVFSAP TTKFAVGVNF
WDVPFSGSID EIKFYDEVVT EQDVKELFDE SK
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