| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1925 |
|---|
| Symbol | |
|---|
| ID | 5078545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2207060 |
|---|
| End bp | 2207263 |
|---|
| Gene Length | 204 bp |
|---|
| Protein Length | 67 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640499086 |
|---|
| Product | thiamine biosynthesis protein ThiS |
|---|
| Protein accession | YP_001183447 |
|---|
| Protein GI | 146293023 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
|---|
| TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAA TTCACATAAA CAATATCCCG CAGTCGTTAT CTGAACCGAC GTCACTAGAG
GCTGTGATCC TCGCGCAAGA TATAGCCCTC GATTCGGTTG CTATTGTGTT GAATGCTGAG
GTGGTTCCGC GCAACCGCTG GCAATCGATT CTCTGCCAAC ATGAAGATAA ATTAGAACTT
TTTTCAGCAG TGGCGGGAGG CTAA
|
|---|
| Protein sequence | MILIHINNIP QSLSEPTSLE AVILAQDIAL DSVAIVLNAE VVPRNRWQSI LCQHEDKLEL
FSAVAGG
|
|---|
| |