Gene Sputcn32_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1916 
Symbol 
ID5078536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2194131 
End bp2194868 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content40% 
IMG OID640499077 
Producthypothetical protein 
Protein accessionYP_001183438 
Protein GI146293014 
COG category[R] General function prediction only 
COG ID[COG2384] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATTA GCCAGCGTTT ACAACACATT AATCATATGG TGCAAGGGCA TTATGATCAT 
ATTTGGGATT GTTGTTGTGA TCATGGTTTA CTTGGCATGA TGTTACTTAA AAGAAATACG
GCCAACCAGG TACATTTTGT CGACTGTGTA GCCCCTTTAA TGTTGCAGTT AACCCAAGAT
TTACAACGTT TTTTCCCTAA GCAAGCCTTT AGTACTGGGC ACAGTGTTGC TCAAAACACA
CTGGGTATTA GTCAGTGGCA AGTGCATTGT CTAAATGCTG CTGATTTACC CATTGAGCAA
ACAGACATCA CAAACACACA TTTGATTATT ATTGCGGGAG TGGGTGGTAA GTTATTAATT
GAACTCGTTC AAGCACTCAT CTCTCGTCAT GGTTCAAGAC AGATAGAGTT TATTTTGTGT
CCCGTGCATC ATAATTATTA TGTTAGGCAC TCCCTAGCCA AGTTGGGTTT CTTTATTCAG
GCTGAGACCC TACTAGAAGA GAATCGACGC TTTTATGAAG TGCTTCATGT GACCCTCGAA
CGTCCTTGTC ATGGTCATCC AGTTACATTG ACGGGTTCAT TAATGTGGGA GGATTTAGAT
AAAAAGGATC TTGATTTAGC TAAGCGTTAT TTATCCCAAG TGATAGCCCA TTACCAGCGA
ATGCCAAGTG ATTTGCAAGT TCCTTATATT ATTCACGCCT ATCAGTCTCA GCTTGCACAA
ATTTCTAACG CTTTTTAA
 
Protein sequence
MKISQRLQHI NHMVQGHYDH IWDCCCDHGL LGMMLLKRNT ANQVHFVDCV APLMLQLTQD 
LQRFFPKQAF STGHSVAQNT LGISQWQVHC LNAADLPIEQ TDITNTHLII IAGVGGKLLI
ELVQALISRH GSRQIEFILC PVHHNYYVRH SLAKLGFFIQ AETLLEENRR FYEVLHVTLE
RPCHGHPVTL TGSLMWEDLD KKDLDLAKRY LSQVIAHYQR MPSDLQVPYI IHAYQSQLAQ
ISNAF