Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1916 |
Symbol | |
ID | 5078536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2194131 |
End bp | 2194868 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640499077 |
Product | hypothetical protein |
Protein accession | YP_001183438 |
Protein GI | 146293014 |
COG category | [R] General function prediction only |
COG ID | [COG2384] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATTA GCCAGCGTTT ACAACACATT AATCATATGG TGCAAGGGCA TTATGATCAT ATTTGGGATT GTTGTTGTGA TCATGGTTTA CTTGGCATGA TGTTACTTAA AAGAAATACG GCCAACCAGG TACATTTTGT CGACTGTGTA GCCCCTTTAA TGTTGCAGTT AACCCAAGAT TTACAACGTT TTTTCCCTAA GCAAGCCTTT AGTACTGGGC ACAGTGTTGC TCAAAACACA CTGGGTATTA GTCAGTGGCA AGTGCATTGT CTAAATGCTG CTGATTTACC CATTGAGCAA ACAGACATCA CAAACACACA TTTGATTATT ATTGCGGGAG TGGGTGGTAA GTTATTAATT GAACTCGTTC AAGCACTCAT CTCTCGTCAT GGTTCAAGAC AGATAGAGTT TATTTTGTGT CCCGTGCATC ATAATTATTA TGTTAGGCAC TCCCTAGCCA AGTTGGGTTT CTTTATTCAG GCTGAGACCC TACTAGAAGA GAATCGACGC TTTTATGAAG TGCTTCATGT GACCCTCGAA CGTCCTTGTC ATGGTCATCC AGTTACATTG ACGGGTTCAT TAATGTGGGA GGATTTAGAT AAAAAGGATC TTGATTTAGC TAAGCGTTAT TTATCCCAAG TGATAGCCCA TTACCAGCGA ATGCCAAGTG ATTTGCAAGT TCCTTATATT ATTCACGCCT ATCAGTCTCA GCTTGCACAA ATTTCTAACG CTTTTTAA
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Protein sequence | MKISQRLQHI NHMVQGHYDH IWDCCCDHGL LGMMLLKRNT ANQVHFVDCV APLMLQLTQD LQRFFPKQAF STGHSVAQNT LGISQWQVHC LNAADLPIEQ TDITNTHLII IAGVGGKLLI ELVQALISRH GSRQIEFILC PVHHNYYVRH SLAKLGFFIQ AETLLEENRR FYEVLHVTLE RPCHGHPVTL TGSLMWEDLD KKDLDLAKRY LSQVIAHYQR MPSDLQVPYI IHAYQSQLAQ ISNAF
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