| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1910 |
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| Symbol | |
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| ID | 5078530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2188522 |
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| End bp | 2189322 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499071 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001183432 |
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| Protein GI | 146293008 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACA TTGTTCCTAA AGCGACATTA TTAGCACCCA GTAATGCCGC ATTTATCATC
GATCCCCATA GACCTGTACT CACCCATGCT CGTAATTTGG ATGCCGAAGC GGGTATTGAA
CCCCATGCAC ACCCAAGGGG ACAGTTACTT TGGGCTGTAA AAGGAATTTT ACGGGTTCGT
AGTGAAAGTG CAGTATGGGT GGTTCCATCA ACCCATGCGG TCTGGATCCC TTGCAATTTG
TCCCATCAAG TCAGTAGTGA AACCTATGCT CATACTCGCA ATCTTTACAT TGACCCAAGC
TATAGTGTCA GAGAACATAA TAAGCAAGTG GTCATGGTGA CCATGACGCC ACTGATGCGG
GAAATTATCC TCAGATTGTG TGAAGCGGAA TCAATGGAGG CAGGGCGCTT ACTTAGGCTT
GGTTTAGCGG CTATCGACGA GCTAGCTACA CTCGATAGTG TTGATGCTCA TTTACCCGCA
GGAAAAGATC CAAGGCTTAG TCGTCTTATC CAAACAATTA TTCGTCAACC TAAAGTTAAT
TACTCACTGA CAGAACTGGC CGAAATAGGG GGGGCAAGTG TGCGAACCGT TGAGCGACTC
TTTAAAGCAG AAACGGGCCT CACTTATCGG CAATGGCGAC AAAGATTTCG CTTATTAAAT
TCTCTTGAGC GATTAACCCA AGGAGAAAGC ACGACGAGGG TAGCGCATAG TCTAGGTTAT
CTAAGCGTTA GCAGTTTCAG TGCGGCTTTT AAAATGCAAT TTGGTTGTAC GCCACAGGAT
TACTCAAAAC ATAAGCGTTA A
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| Protein sequence | MSDIVPKATL LAPSNAAFII DPHRPVLTHA RNLDAEAGIE PHAHPRGQLL WAVKGILRVR
SESAVWVVPS THAVWIPCNL SHQVSSETYA HTRNLYIDPS YSVREHNKQV VMVTMTPLMR
EIILRLCEAE SMEAGRLLRL GLAAIDELAT LDSVDAHLPA GKDPRLSRLI QTIIRQPKVN
YSLTELAEIG GASVRTVERL FKAETGLTYR QWRQRFRLLN SLERLTQGES TTRVAHSLGY
LSVSSFSAAF KMQFGCTPQD YSKHKR
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